Rn00573596_m1 Best Coverage

• Gene Symbol: Gpd1
• Gene Name: glycerol-3-phosphate dehydrogenase 1 (soluble)
• Gene Aliases: GPDH, Gpd3
• Chromosome Location: Chr.7: 141369490 - 141377931 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Gpd1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_022215.2	NP_071551.2	7 - 8	961		79
	XM_006257376.1	XP_006257438.1	8 - 9	1163		79
GenBank mRNA	AB002558.1	-	7 - 8	949		79
	BC088396.1	-	7 - 8	961	7108237	79

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700001823.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Gpd1

Panther Classification:

Molecular Function -

dehydrogenase

Gene Ontology Categories:

Process(es)

carbohydrate metabolic process
glycerol-3-phosphate metabolic process
gluconeogenesis
NADH oxidation
glycerophosphate shuttle
NADH metabolic process
positive regulation of glycolytic process
glycerol-3-phosphate catabolic process
glycerolipid metabolic process
oxidation-reduction process
cellular response to cAMP
cellular response to tumor necrosis factor

Function(s)

glycerol-3-phosphate dehydrogenase [NAD+] activity
glycerol-3-phosphate dehydrogenase activity
protein homodimerization activity
NAD binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P480224	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	83562	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	187024	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	346649	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	81628	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P480224	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P480224	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P480224	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P12167	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700626043	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	65821	-	-
Agilent Rat cDNA Microarray (G4105A)	700626043	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10899194	-	-
Affymetrix Rat Gene 1.0 ST Array	10899195	-	-
Affymetrix Rat Gene 1.0 ST Array	10899192	-	-
Affymetrix Rat Gene 1.0 ST Array	10899190	-	-
Affymetrix Rat Gene 1.0 ST Array	10899193	-	-
Affymetrix Rat Gene 1.0 ST Array	10899196	-	-
Affymetrix Rat Gene 1.0 ST Array	10899189	-	-
Affymetrix Rat Gene 1.0 ST Array	10899191	-	-
Affymetrix Rat Gene 1.0 ST Array	10899188	-	-
Affymetrix Rat Gene 1.1 ST Array	10899187	-	-
Rat Genome 230 2.0 Array	1369560_at	-	-
Rat Genome 230 2.0 Array	1369560_PM_at	-	-
Rat Genome 230 2.0 Array	1371363_at	-	-
Rat Genome 230 2.0 Array	1371363_PM_at	-	-
Affymetrix HT Rat Focus Array	1371363_PM_at	-	-
Affymetrix HT Rat Focus Array	1371363_at	-	-
Affymetrix HT Rat Focus Array	1369560_at	-	-
Affymetrix HT Rat Focus Array	1369560_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0700014098.rn.1	TC0700001823.rn.1	RTA TC
Rat Expression Set 230	1371363_PM_at	-	-
Rat Expression Set 230	1369560_at	-	-
Rat Expression Set 230	1371363_at	-	-
Rat Expression Set 230	1369560_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10899187	-	-
Rat Genome U34 Set	AB002558_at	-	-
Rat Genome U34 Set	rc_AI232970_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21144175	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1353571	-	-
RatRef-12 Expression BeadChip	ILMN_53363	-	-