Rn00574526_m1 Best Coverage

• Gene Symbol: Acvrl1
• Gene Name: activin A receptor type II-like 1
• Gene Aliases: R-3, R3, SETHKIR
• Chromosome Location: Chr.7: 142770486 - 142787336 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Acvrl1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_022441.2	NP_071886.1	9 - 10	1522		122
	XM_006242303.2	XP_006242365.1	10 - 11	1923		122
	XM_006242304.2	XP_006242366.1	10 - 11	2527		122
	XM_006242305.2	XP_006242367.1	9 - 10	2542		122
	XM_006242307.2	XP_006242369.1	9 - 10	2412		122
	XM_008765673.1	XP_008763895.1	10 - 11	2586		122
GenBank mRNA	BC083173.1	-	9 - 10	1522		122
	FQ223580.1	-	9 - 10	1564		122
	L36088.1	-	10 - 11	1937		122

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0700001864.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Acvrl1

Gene Ontology Categories:

Process(es)

angiogenesis
in utero embryonic development
negative regulation of endothelial cell proliferation
positive regulation of endothelial cell proliferation
lymphangiogenesis
blood vessel remodeling
regulation of transcription, DNA-templated
protein phosphorylation
negative regulation of cell adhesion
signal transduction
transforming growth factor beta receptor signaling pathway
blood circulation
regulation of blood pressure
negative regulation of cell population proliferation
negative regulation of endothelial cell migration
positive regulation of pathway-restricted SMAD protein phosphorylation
negative regulation of cell growth
negative regulation of cell migration
BMP signaling pathway
positive regulation of BMP signaling pathway
activin receptor signaling pathway
wound healing, spreading of epidermal cells
negative regulation of blood vessel endothelial cell migration
negative regulation of endothelial cell differentiation
positive regulation of endothelial cell differentiation
positive regulation of angiogenesis
positive regulation of transcription, DNA-templated
positive regulation of transcription by RNA polymerase II
blood vessel morphogenesis
protein heterooligomerization
negative regulation of focal adhesion assembly
lymphatic endothelial cell differentiation
artery development
venous blood vessel development
endothelial tube morphogenesis
retina vasculature development in camera-type eye
cellular response to transforming growth factor beta stimulus
cellular response to BMP stimulus
negative regulation of DNA biosynthetic process

Function(s)

protein serine/threonine kinase activity
transmembrane receptor protein serine/threonine kinase activity
transforming growth factor beta-activated receptor activity
transforming growth factor beta receptor activity, type I
ATP binding
activin receptor activity, type I
protein kinase binding
SMAD binding
metal ion binding
activin binding
transforming growth factor beta binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P771346	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	68981	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	928935	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	668807	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	695179	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	483514	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	139754	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	217867	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	709390	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	370641	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	311570	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	120248	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P771346	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P771346	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P771346	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P771346	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700282925	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	702144068	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	3903	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	57662	-	-
Agilent Rat cDNA Microarray (G4105A)	700282925	-	-
Agilent Rat cDNA Microarray (G4105A)	702144068	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10899356	-	-
Affymetrix Rat Gene 1.0 ST Array	10899363	-	-
Affymetrix Rat Gene 1.0 ST Array	10899361	-	-
Affymetrix Rat Gene 1.0 ST Array	10899360	-	-
Affymetrix Rat Gene 1.0 ST Array	10899362	-	-
Affymetrix Rat Gene 1.0 ST Array	10899355	-	-
Affymetrix Rat Gene 1.0 ST Array	10899364	-	-
Affymetrix Rat Gene 1.0 ST Array	10899358	-	-
Affymetrix Rat Gene 1.0 ST Array	10899365	-	-
Affymetrix Rat Gene 1.0 ST Array	10899359	-	-
Affymetrix Rat Gene 1.0 ST Array	10899357	-	-
Affymetrix Rat Gene 1.0 ST Array	10899366	-	-
Affymetrix Rat Gene 1.1 ST Array	10899354	-	-
Rat Genome 230 2.0 Array	1368553_PM_at	-	-
Rat Genome 230 2.0 Array	1368553_at	-	-
Affymetrix HT Rat Focus Array	1368553_at	-	-
Affymetrix HT Rat Focus Array	1368553_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0700014484.rn.1	TC0700001864.rn.1	RTA TC
Rat Expression Set 230	1368553_at	-	-
Rat Expression Set 230	1368553_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10899354	-	-
Rat Genome U34 Set	L36088_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21941172	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1358119	-	-
RatRef-12 Expression BeadChip	ILMN_57154	-	-