Rn00574992_m1 Best Coverage

• Gene Symbol: Ech1
• Gene Name: enoyl CoA hydratase 1, peroxisomal
• Gene Aliases: Pxel
• Chromosome Location: Chr.1: 87009798 - 87015996 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ech1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_022594.1	NP_072116.1	3 - 4	351		64
GenBank mRNA	BC060565.1	-	3 - 4	357		64
	BC062226.1	-	3 - 4	357	6890529	64
	FQ214121.1	-	3 - 4	353		64
	FQ230435.1	-	3 - 4	364		64
	U08976.1	-	3 - 4	351		64

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100001192.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ech1

Panther Classification:

Molecular Function -

hydratase, lyase, metabolite interconversion enzyme

Gene Ontology Categories:

Process(es)

fatty acid beta-oxidation

Function(s)

receptor binding
isomerase activity
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P241885	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	936864	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	2320	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	522210	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	350224	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	164410	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	540921	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	171048	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P241885	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P241885	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P241885	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P241885	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700247611	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	8070	-	-
Agilent Rat cDNA Microarray (G4105A)	700247611	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10705638	-	-
Affymetrix Rat Gene 1.0 ST Array	10705635	-	-
Affymetrix Rat Gene 1.0 ST Array	10705632	-	-
Affymetrix Rat Gene 1.0 ST Array	10705634	-	-
Affymetrix Rat Gene 1.0 ST Array	10705633	-	-
Affymetrix Rat Gene 1.0 ST Array	10705637	-	-
Affymetrix Rat Gene 1.0 ST Array	10705640	-	-
Affymetrix Rat Gene 1.0 ST Array	10705639	-	-
Affymetrix Rat Gene 1.0 ST Array	10705641	-	-
Affymetrix Rat Gene 1.1 ST Array	10705631	-	-
Rat Genome 230 2.0 Array	1386885_PM_at	-	-
Rat Genome 230 2.0 Array	1386885_at	-	-
Affymetrix HT Rat Focus Array	1386885_at	-	-
Affymetrix HT Rat Focus Array	1386885_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100009021.rn.1	TC0100001192.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100009020.rn.1	TC0100001192.rn.1	RTA TC
Rat Expression Set 230	1386885_at	-	-
Rat Expression Set 230	1386885_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10705631	-	-
Rat Genome U34 Set	U08976_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21593647	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1364554	-	-
RatRef-12 Expression BeadChip	ILMN_68003	-	-