Rn00576012_m1

• Gene Symbol: Dnaja1
• Gene Name: DnaJ (Hsp40) homolog, subfamily A, member 1
• Gene Aliases: Hsj2
• Chromosome Location: Chr.5: 57028467 - 57040030 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Dnaja1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_022934.1	NP_075223.1	1 - 2	107		111
GenBank mRNA	BC062009.1	-	1 - 2	64	5621557	111
	FQ216722.1	-	1 - 2	96		111
	U53922.1	-	1 - 2	107		111

More Information

Additional Information:

This assay is in the 5'UTR region of the BC062009.1, NM_022934.1, U53922.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Rattus norvegicus, Rat Androgen Panel, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Dnaja1

Panther Classification:

Molecular Function -

chaperone

Gene Ontology Categories:

Process(es)

spermatogenesis
response to heat
sperm motility
androgen receptor signaling pathway
negative regulation of protein ubiquitination
protein refolding
DNA damage response, detection of DNA damage
positive regulation of apoptotic process
negative regulation of apoptotic process
negative regulation of JUN kinase activity
regulation of protein transport
protein localization to mitochondrion
toxin transport

Function(s)

G-protein coupled receptor binding
ATP binding
Hsp70 protein binding
ubiquitin protein ligase binding
metal ion binding
low-density lipoprotein particle receptor binding
unfolded protein binding
chaperone binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P555253	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	720456	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	166574	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	739358	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	372666	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	971191	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	830739	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	427950	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	408938	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	30342	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P555253	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P555253	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P555253	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P555253	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	22283	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	60942	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10868291	-	-
Affymetrix Rat Gene 1.0 ST Array	10868296	-	-
Affymetrix Rat Gene 1.0 ST Array	10868290	-	-
Affymetrix Rat Gene 1.0 ST Array	10868297	-	-
Affymetrix Rat Gene 1.0 ST Array	10868293	-	-
Affymetrix Rat Gene 1.0 ST Array	10868292	-	-
Affymetrix Rat Gene 1.0 ST Array	10928523	-	-
Affymetrix Rat Gene 1.0 ST Array	10868294	-	-
Affymetrix Rat Gene 1.0 ST Array	10868295	-	-
Affymetrix Rat Gene 1.0 ST Array	10868298	-	-
Affymetrix Rat Gene 1.0 ST Array	10868299	-	-
Affymetrix Rat Gene 1.1 ST Array	10928522	-	-
Affymetrix Rat Gene 1.1 ST Array	10868289	-	-
Rat Genome 230 2.0 Array	1398819_at	-	-
Rat Genome 230 2.0 Array	1398819_PM_at	-	-
Rat Genome 230 2.0 Array	1368852_at	-	-
Rat Genome 230 2.0 Array	1368852_PM_at	-	-
Affymetrix HT Rat Focus Array	1398819_PM_at	-	-
Affymetrix HT Rat Focus Array	1398819_at	-	-
Affymetrix HT Rat Focus Array	1368852_at	-	-
Affymetrix HT Rat Focus Array	1368852_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500002828.rn.1	TC0500000473.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500002834.rn.1	TC0500000473.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500002838.rn.1	TC0500000473.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500002825.rn.1	TC0500000473.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500002826.rn.1	TC0500000473.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500002831.rn.1	TC0500000473.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500002833.rn.1	TC0500000473.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500002814.rn.1	TC0500000473.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500002816.rn.1	TC0500000473.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500002827.rn.1	TC0500000473.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500002837.rn.1	TC0500000473.rn.1	RTA TC
Rat Expression Set 230	1368852_at	-	-
Rat Expression Set 230	1398819_at	-	-
Rat Expression Set 230	1368852_PM_at	-	-
Rat Expression Set 230	1398819_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10868289	-	-
Rat Genome U34 Set	rc_AA800551_at	-	-
Rat Genome U34 Set	U53922_at	-	-
Rat Genome U34 Set	U53922_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21479493	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1365695	-	-
RatRef-12 Expression BeadChip	ILMN_67372	-	-