Rn00576935_m1 Best Coverage

• Gene Symbol: Prkaa2
• Gene Name: protein kinase, AMP-activated, alpha 2 catalytic subunit
• Gene Aliases: Ampk, Ampka2
• Chromosome Location: Chr.5: 124568845 - 124642569 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Prkaa2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_023991.1	NP_076481.1	5 - 6	576		65
	XM_008763901.1	XP_008762123.1	4 - 5	2305		65
GenBank mRNA	U12149.1	-	5 - 6	761		65
	Z29486.1	-	5 - 6	576		65

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500003263.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Recommended Assay, Rattus norvegicus, Rat Hypoxia Panel, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Prkaa2

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
protein phosphorylation
fatty acid biosynthetic process
cholesterol biosynthetic process
autophagy
lipid biosynthetic process
positive regulation of autophagy
response to activity
Wnt signaling pathway
regulation of lipid metabolic process
response to caffeine
cellular response to nutrient levels
negative regulation of TOR signaling
histone-serine phosphorylation
cellular response to glucose starvation
glucose homeostasis
regulation of circadian rhythm
negative regulation of apoptotic process
positive regulation of glycolytic process
rhythmic process
protein heterooligomerization
fatty acid homeostasis
cellular response to prostaglandin E stimulus
cellular response to organonitrogen compound
energy homeostasis

Function(s)

chromatin binding
protein kinase activity
protein serine/threonine kinase activity
AMP-activated protein kinase activity
protein serine/threonine/tyrosine kinase activity
protein binding
ATP binding
protein-macromolecule adaptor activity
histone serine kinase activity
metal ion binding
[hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity
[acetyl-CoA carboxylase] kinase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0500023693.rn.1	TC0500003263.rn.1	RTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21553293	-	-