Rn00577775_m1 Best Coverage

• Gene Symbol: Hpgd
• Gene Name: hydroxyprostaglandin dehydrogenase 15 (NAD)
• Gene Aliases: -
• Chromosome Location: Chr.16: 37457134 - 37495758 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Hpgd
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_024390.2	NP_077366.2	4 - 5	440		83
GenBank mRNA	BC062399.1	-	4 - 5	440	5599288	83
	U44750.1	-	4 - 5	456		83

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1600001566.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Rat Inflammation, 1700, Inventoried, Rat_Inflammation, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Hpgd

Panther Classification:

Molecular Function -

dehydrogenase

Gene Ontology Categories:

Process(es)

prostaglandin metabolic process
transforming growth factor beta receptor signaling pathway
female pregnancy
parturition
ovulation
negative regulation of cell cycle
oxidation-reduction process
thrombin receptor signaling pathway
ductus arteriosus closure

Function(s)

catalytic activity
prostaglandin E receptor activity
15-hydroxyprostaglandin dehydrogenase (NAD+) activity
NAD binding
NAD+ binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P11278	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	159434	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	119472	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	385643	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	459482	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	160731	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	744487	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	528398	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	832289	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	946030	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	581666	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	442246	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	232156	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	439927	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	649241	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	431323	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	883783	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	243368	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	584341	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	782608	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	699789	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	510332	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	891538	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	933337	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	141490	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	324041	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	725524	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	156951	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	7373	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	11511	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	36718	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	42877	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P11278	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P11278	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P11278	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P11278	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	1500	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	72422	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	67964	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10791527	-	-
Affymetrix Rat Gene 1.0 ST Array	10791526	-	-
Affymetrix Rat Gene 1.0 ST Array	10791530	-	-
Affymetrix Rat Gene 1.0 ST Array	10791523	-	-
Affymetrix Rat Gene 1.0 ST Array	10791529	-	-
Affymetrix Rat Gene 1.0 ST Array	10791525	-	-
Affymetrix Rat Gene 1.0 ST Array	10791524	-	-
Affymetrix Rat Gene 1.0 ST Array	10791528	-	-
Affymetrix Rat Gene 1.1 ST Array	10791522	-	-
Rat Genome 230 2.0 Array	1376191_PM_at	-	-
Rat Genome 230 2.0 Array	1376191_at	-	-
Rat Genome 230 2.0 Array	1387631_at	-	-
Rat Genome 230 2.0 Array	1387631_PM_at	-	-
Affymetrix HT Rat Focus Array	1387631_PM_at	-	-
Affymetrix HT Rat Focus Array	1376191_PM_at	-	-
Affymetrix HT Rat Focus Array	1387631_at	-	-
Affymetrix HT Rat Focus Array	1376191_at	-	-
Affymetrix Rat Clariom S Assay	PSR1600011881.rn.1	TC1600001566.rn.1	RTA TC
Rat Expression Set 230	1376191_at	-	-
Rat Expression Set 230	1387631_PM_at	-	-
Rat Expression Set 230	1376191_PM_at	-	-
Rat Expression Set 230	1387631_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10791522	-	-
Rat Genome U34 Set	U44750_at	-	-
Rat Genome U34 Set	rc_AA848820_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21233763	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1367170	-	-
RatRef-12 Expression BeadChip	ILMN_53529	-	-