Rn00578613_m1 Best Coverage

• Gene Symbol: Akr1a1
• Gene Name: aldo-keto reductase family 1, member A1 (aldehyde reductase)
• Gene Aliases: Akr1a4
• Chromosome Location: Chr.5: 135482068 - 135498693 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Akr1a1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031000.3	NP_112262.1	2 - 3	136		136
GenBank mRNA	BC059133.1	-	2 - 3	415	6918695	136
	D10854.1	-	2 - 3	136		136
	FQ212779.1	-	2 - 3	411		136
	FQ212919.1	-	1 - 2	86		136
	FQ213220.1	-	1 - 2	83		136
	FQ213467.1	-	2 - 3	411		136
	FQ213483.1	-	2 - 3	407		136
	FQ213579.1	-	2 - 3	378		136
	FQ213776.1	-	2 - 3	378		136
	FQ214173.1	-	2 - 3	378		136
	FQ214700.1	-	2 - 3	351		136
	FQ215620.1	-	2 - 3	203		136
	FQ215772.1	-	2 - 3	378		136
	FQ218383.1	-	2 - 3	378		136
	FQ218721.1	-	2 - 3	378		136
	FQ226221.1	-	2 - 3	411		136
	FQ228131.1	-	2 - 3	411		136
	FQ228132.1	-	2 - 3	411		136
	FQ228842.1	-	2 - 3	407		136
	FQ233156.1	-	2 - 3	411		136

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500003417.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Akr1a1

Panther Classification:

Molecular Function -

oxidoreductase, reductase, metabolite interconversion enzyme

Gene Ontology Categories:

Process(es)

biological_process
L-ascorbic acid biosynthetic process
D-glucuronate catabolic process
aldehyde catabolic process
oxidation-reduction process

Function(s)

molecular_function
alditol:NADP+ 1-oxidoreductase activity
alcohol dehydrogenase (NADP+) activity
L-glucuronate reductase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P570919	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	212718	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	538931	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	674238	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	421452	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	78957	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	277160	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	837429	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	679949	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	582429	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	505271	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	91411	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	472456	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	19022	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	116371	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P570919	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P570919	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P570919	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P570919	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700174605	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	69275	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	59801	-	-
Agilent Rat cDNA Microarray (G4105A)	700174605	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10878899	-	-
Affymetrix Rat Gene 1.0 ST Array	10878901	-	-
Affymetrix Rat Gene 1.0 ST Array	10878902	-	-
Affymetrix Rat Gene 1.0 ST Array	10878900	-	-
Affymetrix Rat Gene 1.0 ST Array	10878896	-	-
Affymetrix Rat Gene 1.0 ST Array	10878898	-	-
Affymetrix Rat Gene 1.0 ST Array	10878904	-	-
Affymetrix Rat Gene 1.0 ST Array	10878903	-	-
Affymetrix Rat Gene 1.0 ST Array	10878897	-	-
Affymetrix Rat Gene 1.1 ST Array	10878895	-	-
Rat Genome 230 2.0 Array	1398753_PM_at	-	-
Rat Genome 230 2.0 Array	1398753_at	-	-
Affymetrix HT Rat Focus Array	1398753_at	-	-
Affymetrix HT Rat Focus Array	1398753_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500024959.rn.1	TC0500003417.rn.1	RTA TC
Rat Expression Set 230	1398753_PM_at	-	-
Rat Expression Set 230	1398753_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10878895	-	-
Rat Genome U34 Set	D10854_at	-	-
Rat Genome U34 Set	D10854_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21340963	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1373732	-	-
RatRef-12 Expression BeadChip	ILMN_54408	-	-