Rn00578954_m1 Best Coverage

• Gene Symbol: Gatm
• Gene Name: glycine amidinotransferase (L-arginine:glycine amidinotransferase)
• Gene Aliases: -
• Chromosome Location: Chr.3: 114711570 - 114728155 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Gatm
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031031.2	NP_112293.1	6 - 7	1034		73
GenBank mRNA	AY625271.1	-	4 - 5	622		73
	BC081785.1	-	6 - 7	1034	7132560	73
	FQ212973.1	-	2 - 3	205		73
	U07971.1	-	6 - 7	1026		73

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300004054.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Gatm

Panther Classification:

Molecular Function -

transferase, metabolite interconversion enzyme

Gene Ontology Categories:

Process(es)

creatine biosynthetic process
response to oxidative stress
response to nutrient
response to organic substance
tissue regeneration
response to peptide hormone
response to mercury ion
embryonic liver development

Function(s)

amidinotransferase activity
glycine amidinotransferase activity
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P623688	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P054994	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	752158	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	574304	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	411220	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	773328	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	96228	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P623688	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P054994	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P623688	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P054994	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P623688	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P054994	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P623688	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	702200689	-	-
Agilent Rat cDNA Microarray (G4105A)	702200689	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10849293	-	-
Affymetrix Rat Gene 1.0 ST Array	10849291	-	-
Affymetrix Rat Gene 1.0 ST Array	10849292	-	-
Affymetrix Rat Gene 1.1 ST Array	10849290	-	-
Rat Genome 230 2.0 Array	1367627_PM_at	-	-
Rat Genome 230 2.0 Array	1377784_PM_at	-	-
Rat Genome 230 2.0 Array	1377784_at	-	-
Rat Genome 230 2.0 Array	1367627_at	-	-
Affymetrix HT Rat Focus Array	1367627_at	-	-
Affymetrix HT Rat Focus Array	1367627_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300031262.rn.1	TC0300004054.rn.1	RTA TC
Rat Expression Set 230	1367627_PM_at	-	-
Rat Expression Set 230	1367627_at	-	-
Rat Expression Set 230	1377784_at	-	-
Rat Expression Set 230	1377784_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10849290	-	-
Rat Genome U34 Set	U07971_at	-	-
Rat Genome U34 Set	rc_AI236620_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21929757	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376665	-	-
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1375328	-	-