Rn00579002_m1 Best Coverage

• Gene Symbol: Gtf2b
• Gene Name: general transcription factor IIB
• Gene Aliases: -
• Chromosome Location: Chr.2: 248709433 - 248727741 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Gtf2b
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031041.1	NP_112303.1	3	142		76
GenBank mRNA	BC085345.1	-	3	147	7303747	76
	FQ229769.1	-	3	130		76
	FQ231337.1	-	3	172		76
	X65948.1	-	3	142		76

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200002324.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Amplicon spans exons and probe does not span exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Gtf2b

Panther Classification:

Molecular Function -

general transcription factor

Gene Ontology Categories:

Process(es)

DNA-templated transcription, initiation
regulation of transcription, DNA-templated

Function(s)

core promoter binding
DNA binding
transcription factor binding
zinc ion binding
TBP-class protein binding
thyroid hormone receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P1023146	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	821421	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	370891	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	172709	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	542673	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	663507	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	372722	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	791361	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	549390	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	708197	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	379397	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	401977	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	570365	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	581051	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	157731	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	131816	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1023146	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1023146	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P1023146	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1023146	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	27287	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	78950	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10819558	-	-
Affymetrix Rat Gene 1.0 ST Array	10819561	-	-
Affymetrix Rat Gene 1.0 ST Array	10819556	-	-
Affymetrix Rat Gene 1.0 ST Array	10819560	-	-
Affymetrix Rat Gene 1.0 ST Array	10819557	-	-
Affymetrix Rat Gene 1.0 ST Array	10819559	-	-
Affymetrix Rat Gene 1.1 ST Array	10819555	-	-
Rat Genome 230 2.0 Array	1368220_PM_at	-	-
Rat Genome 230 2.0 Array	1368220_at	-	-
Affymetrix HT Rat Focus Array	1368220_at	-	-
Affymetrix HT Rat Focus Array	1368220_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200016305.rn.1	TC0200002324.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200016304.rn.1	TC0200002324.rn.1	RTA TC
Rat Expression Set 230	1368220_PM_at	-	-
Rat Expression Set 230	1368220_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10819555	-	-
Rat Genome U34 Set	X65948_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20858182	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1366282	-	-
RatRef-12 Expression BeadChip	ILMN_65555	-	-