Rn00579172_m1 Best Coverage

• Gene Symbol: Mmp14
• Gene Name: matrix metallopeptidase 14 (membrane-inserted)
• Gene Aliases: Mt1-mmp
• Chromosome Location: Chr.15: 33074441 - 33083666 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Mmp14
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031056.1	NP_112318.1	1 - 2	273		62
GenBank mRNA	BC072509.1	-	1 - 2	304	7103279	62
	X83537.1	-	1 - 2	282		62
	X91785.1	-	1 - 2	273		62

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1500000461.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Protease, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Rat Tumor Metastasis Panel, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Mmp14

Panther Classification:

Molecular Function -

metalloprotease

Gene Ontology Categories:

Process(es)

ossification
angiogenesis
ovarian follicle development
response to hypoxia
endothelial cell proliferation
endochondral ossification
regulation of transcription, DNA-templated
proteolysis
response to oxidative stress
male gonad development
response to mechanical stimulus
response to hormone
positive regulation of peptidase activity
response to organic cyclic compound
cell migration
positive regulation of cell growth
lung development
positive regulation of cell migration
collagen catabolic process
zymogen activation
endodermal cell differentiation
chondrocyte proliferation
astrocyte cell migration
response to estrogen
embryonic cranial skeleton morphogenesis
branching morphogenesis of an epithelial tube
tissue remodeling
negative regulation of focal adhesion assembly
bone development
craniofacial suture morphogenesis

Function(s)

transcription factor activity, sequence-specific DNA binding
metalloendopeptidase activity
integrin binding
calcium ion binding
zinc ion binding
peptidase activator activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P639027	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	437353	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	350065	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	270859	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	218704	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	241826	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	509966	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	934481	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	196911	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	17968	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P639027	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P639027	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P639027	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P14927	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	701594592	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700174724	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	96043	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	29025	-	-
Agilent Rat cDNA Microarray (G4105A)	700174724	-	-
Agilent Rat cDNA Microarray (G4105A)	701594592	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10780208	-	-
Affymetrix Rat Gene 1.0 ST Array	10780210	-	-
Affymetrix Rat Gene 1.0 ST Array	10780212	-	-
Affymetrix Rat Gene 1.0 ST Array	10780215	-	-
Affymetrix Rat Gene 1.0 ST Array	10780209	-	-
Affymetrix Rat Gene 1.0 ST Array	10780217	-	-
Affymetrix Rat Gene 1.0 ST Array	10780214	-	-
Affymetrix Rat Gene 1.0 ST Array	10780207	-	-
Affymetrix Rat Gene 1.0 ST Array	10780211	-	-
Affymetrix Rat Gene 1.0 ST Array	10780206	-	-
Affymetrix Rat Gene 1.0 ST Array	10780213	-	-
Affymetrix Rat Gene 1.0 ST Array	10780216	-	-
Affymetrix Rat Gene 1.1 ST Array	10780205	-	-
Rat Genome 230 2.0 Array	1367860_PM_a_at	-	-
Rat Genome 230 2.0 Array	1378225_at	-	-
Rat Genome 230 2.0 Array	1367860_a_at	-	-
Rat Genome 230 2.0 Array	1378225_PM_at	-	-
Affymetrix HT Rat Focus Array	1378225_PM_at	-	-
Affymetrix HT Rat Focus Array	1378225_at	-	-
Affymetrix HT Rat Focus Array	1367860_a_at	-	-
Affymetrix HT Rat Focus Array	1367860_PM_a_at	-	-
Affymetrix Rat Clariom S Assay	PSR1500002892.rn.1	TC1500000461.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1500002889.rn.1	TC1500000461.rn.1	RTA TC
Rat Expression Set 230	1367860_PM_a_at	-	-
Rat Expression Set 230	1367860_a_at	-	-
Rat Expression Set 230	1378225_at	-	-
Rat Expression Set 230	1378225_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10780205	-	-
Rat Genome U34 Set	X83537_at	-	-
Rat Genome U34 Set	rc_AI070584_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21449554	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1365885	-	-
RatRef-12 Expression BeadChip	ILMN_62465	-	-