Rn00579182_m1 Best Coverage

• Gene Symbol: Aldh6a1
• Gene Name: aldehyde dehydrogenase 6 family, member A1
• Gene Aliases: Mmsdh
• Chromosome Location: Chr.6: 108146552 - 108167185 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Aldh6a1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031057.2	NP_112319.2	11 - 12	1545		129
	XM_006240354.2	XP_006240416.1	11 - 12	1910		129
	XM_008764862.1	XP_008763084.1	10 - 11	1449		129
	XM_008764863.1	XP_008763085.1	11 - 12	1547		129
GenBank mRNA	CK476335.1	-	1 - 2	112		129

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0600002857.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Aldh6a1

Panther Classification:

Molecular Function -

dehydrogenase

Gene Ontology Categories:

Process(es)

thymine catabolic process
valine metabolic process
valine catabolic process
beta-alanine catabolic process
thymine metabolic process
brown fat cell differentiation
oxidation-reduction process

Function(s)

fatty-acyl-CoA binding
aldehyde dehydrogenase (NAD) activity
methylmalonate-semialdehyde dehydrogenase (acylating) activity
thiolester hydrolase activity
malonate-semialdehyde dehydrogenase (acetylating) activity
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P555261	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	955583	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	585773	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	188890	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	245173	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	94171	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	900279	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	360982	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	917235	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	880906	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	897285	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	550923	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	218249	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	953150	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	72180	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	124470	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P555261	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P555261	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P555261	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P555261	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	2046	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	48659	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	75441	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10891131	-	-
Affymetrix Rat Gene 1.0 ST Array	10891127	-	-
Affymetrix Rat Gene 1.0 ST Array	10891123	-	-
Affymetrix Rat Gene 1.0 ST Array	10891129	-	-
Affymetrix Rat Gene 1.0 ST Array	10891132	-	-
Affymetrix Rat Gene 1.0 ST Array	10891124	-	-
Affymetrix Rat Gene 1.0 ST Array	10891128	-	-
Affymetrix Rat Gene 1.0 ST Array	10891125	-	-
Affymetrix Rat Gene 1.0 ST Array	10891122	-	-
Affymetrix Rat Gene 1.0 ST Array	10891130	-	-
Affymetrix Rat Gene 1.0 ST Array	10891126	-	-
Affymetrix Rat Gene 1.0 ST Array	10891121	-	-
Affymetrix Rat Gene 1.1 ST Array	10891120	-	-
Rat Genome 230 2.0 Array	1387344_PM_at	-	-
Rat Genome 230 2.0 Array	1368814_PM_at	-	-
Rat Genome 230 2.0 Array	1368814_at	-	-
Rat Genome 230 2.0 Array	1387344_at	-	-
Affymetrix HT Rat Focus Array	1368814_at	-	-
Affymetrix HT Rat Focus Array	1387344_at	-	-
Affymetrix HT Rat Focus Array	1368814_PM_at	-	-
Affymetrix HT Rat Focus Array	1387344_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0600020137.rn.1	TC0600002857.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600020136.rn.1	TC0600002857.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600020135.rn.1	TC0600002857.rn.1	RTA TC
Rat Expression Set 230	1368814_PM_at	-	-
Rat Expression Set 230	1387344_PM_at	-	-
Rat Expression Set 230	1368814_at	-	-
Rat Expression Set 230	1387344_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10891120	-	-
Rat Genome U34 Set	M93401_at	-	-
Rat Genome U34 Set	rc_AI171803_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20708753	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1354510	-	-
RatRef-12 Expression BeadChip	ILMN_53446	-	-