Rn00580060_m1 Best Coverage

• Gene Symbol: Bcl10
• Gene Name: B-cell CLL/lymphoma 10
• Gene Aliases: -
• Chromosome Location: Chr.2: 251805392 - 251814957 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Bcl10
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031328.1	NP_112618.1	2 - 3	477		76
GenBank mRNA	AB016069.1	-	2 - 3	477		76
	BC061772.1	-	2 - 3	465		76

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200002364.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Bcl10

Gene Ontology Categories:

Process(es)

B cell apoptotic process
neural tube closure
response to molecule of bacterial origin
adaptive immune response
negative regulation of mature B cell apoptotic process
apoptotic process
cellular defense response
I-kappaB kinase/NF-kappaB signaling
cell death
response to fungus
immunoglobulin mediated immune response
positive regulation of protein ubiquitination
response to food
positive regulation of phosphorylation
positive regulation of apoptotic process
positive regulation of I-kappaB kinase/NF-kappaB signaling
positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
fibroblast apoptotic process
innate immune response
positive regulation of transcription, DNA-templated
T cell receptor signaling pathway
regulation of T cell receptor signaling pathway
positive regulation of T cell activation
positive regulation of NF-kappaB transcription factor activity
protein complex oligomerization
protein homooligomerization
protein heterooligomerization
T cell apoptotic process
thymocyte apoptotic process
cellular response to mechanical stimulus
positive regulation of extrinsic apoptotic signaling pathway

Function(s)

protease binding
transcription coactivator activity
protein binding
protein C-terminus binding
transcription factor binding
kinase activator activity
enzyme binding
kinase binding
protein kinase binding
ubiquitin protein ligase binding
ubiquitin binding
protein kinase B binding
protein self-association
NF-kappaB binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P264102	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	23799	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	564297	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	228811	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	347203	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	311670	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	67148	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P264102	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P264102	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P264102	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P264102	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700311502	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	89531	-	-
Agilent Rat cDNA Microarray (G4105A)	700311502	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10819656	-	-
Affymetrix Rat Gene 1.0 ST Array	10819654	-	-
Affymetrix Rat Gene 1.0 ST Array	10819655	-	-
Affymetrix Rat Gene 1.0 ST Array	10819657	-	-
Affymetrix Rat Gene 1.1 ST Array	10819653	-	-
Rat Genome 230 2.0 Array	1368118_PM_at	-	-
Rat Genome 230 2.0 Array	1368118_at	-	-
Affymetrix HT Rat Focus Array	1368118_PM_at	-	-
Affymetrix HT Rat Focus Array	1368118_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200016555.rn.1	TC0200002364.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200016556.rn.1	TC0200002364.rn.1	RTA TC
Rat Expression Set 230	1368118_at	-	-
Rat Expression Set 230	1368118_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10819653	-	-
Rat Genome U34 Set	rc_AI104659_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22124924	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1350965	-	-
RatRef-12 Expression BeadChip	ILMN_64237	-	-