Rn00580421_m1 Best Coverage

• Gene Symbol: Idh1
• Gene Name: isocitrate dehydrogenase 1 (NADP+), soluble
• Gene Aliases: -
• Chromosome Location: Chr.9: 71882108 - 71911626 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Idh1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031510.1	NP_113698.1	3 - 4	550		100
	XM_006245049.2	XP_006245111.1	4 - 5	608		100
	XM_008767076.1	XP_008765298.1	4 - 5	640		100
GenBank mRNA	DQ403076.1	-	3 - 4	440		100
	FQ214242.1	-	4 - 5	631		100
	L35317.1	-	3 - 4	550		100

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0900002127.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Idh1

Panther Classification:

Molecular Function -

dehydrogenase

Gene Ontology Categories:

Process(es)

glyoxylate cycle
tricarboxylic acid cycle
isocitrate metabolic process
2-oxoglutarate metabolic process
glutathione metabolic process
response to oxidative stress
female gonad development
response to organic cyclic compound
response to steroid hormone
regulation of phospholipid catabolic process
regulation of phospholipid biosynthetic process

Function(s)

magnesium ion binding
isocitrate dehydrogenase (NADP+) activity
receptor binding
protein homodimerization activity
NADP binding
NAD binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P055450	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	106446	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	5178	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	480549	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	872678	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	890241	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	118243	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	518529	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	683729	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	966688	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	541580	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	818857	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	186452	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	203593	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	685566	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	5400	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	51387	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P055450	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P055450	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P055450	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P12569	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	49789	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	41495	-	-
Agilent Rat cDNA Microarray (G4105A)	701321074	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10928571	-	-
Affymetrix Rat Gene 1.0 ST Array	10928570	-	-
Affymetrix Rat Gene 1.0 ST Array	10928569	-	-
Affymetrix Rat Gene 1.0 ST Array	10928565	-	-
Affymetrix Rat Gene 1.0 ST Array	10928566	-	-
Affymetrix Rat Gene 1.0 ST Array	10928567	-	-
Affymetrix Rat Gene 1.0 ST Array	10928564	-	-
Affymetrix Rat Gene 1.0 ST Array	10928568	-	-
Affymetrix Rat Gene 1.1 ST Array	10928563	-	-
Rat Genome 230 2.0 Array	1394886_PM_at	-	-
Rat Genome 230 2.0 Array	1369954_at	-	-
Rat Genome 230 2.0 Array	1394886_at	-	-
Rat Genome 230 2.0 Array	1369954_PM_at	-	-
Affymetrix HT Rat Focus Array	1369954_PM_at	-	-
Affymetrix HT Rat Focus Array	1394886_at	-	-
Affymetrix HT Rat Focus Array	1369954_at	-	-
Affymetrix HT Rat Focus Array	1394886_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0900017487.rn.1	TC0900002127.rn.1	RTA TC
Rat Expression Set 230	1369954_at	-	-
Rat Expression Set 230	1369954_PM_at	-	-
Rat Expression Set 230	1394886_PM_at	-	-
Rat Expression Set 230	1394886_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10928563	-	-
Rat Genome U34 Set	rc_AA892314_at	-	-
Rat Genome U34 Set	rc_AA944025_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21388288	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1353960	-	-
RatRef-12 Expression BeadChip	ILMN_50766	-	-