Rn00580896_m1 Best Coverage

• Gene Symbol: Pla2g1b
• Gene Name: phospholipase A2, group IB, pancreas
• Gene Aliases: -
• Chromosome Location: Chr.12: 46879346 - 46889177 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pla2g1b
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031585.1	NP_113773.1	3 - 4	332		57
	XM_008769222.1	XP_008767444.1	3 - 4	440		57
GenBank mRNA	D00036.1	-	3 - 4	332		57

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200001741.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Recommended Assay, Rattus norvegicus, Rat Inflammation, 1700, Inventoried, Rat_Inflammation, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pla2g1b

Panther Classification:

Molecular Function -

phospholipase

Gene Ontology Categories:

Process(es)

innate immune response in mucosa
fatty acid biosynthetic process
phospholipid metabolic process
glucose transport
antibacterial humoral response
cellular response to insulin stimulus
multicellular organism lipid catabolic process
positive regulation of DNA replication
phosphatidylcholine metabolic process
defense response to Gram-positive bacterium

Function(s)

phospholipase A2 activity
receptor binding
calcium ion binding
calcium-dependent phospholipase A2 activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P15319	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	86902	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	115070	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	694740	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	107612	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	165784	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	344688	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	646712	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	121655	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	64272	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P15319	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P15319	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P15319	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P15319	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	58825	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10762686	-	-
Affymetrix Rat Gene 1.0 ST Array	10762687	-	-
Affymetrix Rat Gene 1.0 ST Array	10762685	-	-
Affymetrix Rat Gene 1.0 ST Array	10762684	-	-
Affymetrix Rat Gene 1.1 ST Array	10762683	-	-
Rat Genome 230 2.0 Array	1370257_PM_at	-	-
Rat Genome 230 2.0 Array	1370257_at	-	-
Affymetrix HT Rat Focus Array	1370257_at	-	-
Affymetrix HT Rat Focus Array	1370257_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1200014895.rn.1	TC1200001741.rn.1	RTA TC
Rat Expression Set 230	1370257_at	-	-
Rat Expression Set 230	1370257_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10762683	-	-
Rat Genome U34 Set	D00036_at	-	-
Rat Genome U34 Set	D00036_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22091327	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1361743	-	-
RatRef-12 Expression BeadChip	ILMN_52929	-	-