Rn00581137_m1 Best Coverage

• Gene Symbol: Prg2
• Gene Name: proteoglycan 2, bone marrow
• Gene Aliases: -
• Chromosome Location: Chr.3: 72385678 - 72389245 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Prg2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031619.2	NP_113807.2	4 - 5	556		59
GenBank mRNA	CA509460.1	-	2 - 3			59
	D50568.1	-	4 - 5	556		59

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300000979.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Prg2

Panther Classification:

Molecular Function -

extracellular matrix structural protein

Gene Ontology Categories:

Process(es)

defense response to nematode
immune response
negative regulation of interleukin-10 production
positive regulation of interleukin-4 production
defense response to bacterium

Function(s)

heparin binding
carbohydrate binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P499899	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	337851	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	628700	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	47163	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	175901	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P499899	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P499899	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P499899	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P499899	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	88893	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10837386	-	-
Affymetrix Rat Gene 1.0 ST Array	10837383	-	-
Affymetrix Rat Gene 1.0 ST Array	10837384	-	-
Affymetrix Rat Gene 1.0 ST Array	10837385	-	-
Affymetrix Rat Gene 1.0 ST Array	10837382	-	-
Affymetrix Rat Gene 1.1 ST Array	10837381	-	-
Rat Genome 230 2.0 Array	1387633_PM_at	-	-
Rat Genome 230 2.0 Array	1387633_at	-	-
Affymetrix HT Rat Focus Array	1387633_at	-	-
Affymetrix HT Rat Focus Array	1387633_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300007283.rn.1	TC0300000979.rn.1	RTA TC
Rat Expression Set 230	1387633_at	-	-
Rat Expression Set 230	1387633_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10837381	-	-
Rat Genome U34 Set	D50568_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20932729	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1357029	-	-
RatRef-12 Expression BeadChip	ILMN_50556	-	-