Rn00581212_m1 Best Coverage

• Gene Symbol: Casp9
• Gene Name: caspase 9, apoptosis-related cysteine peptidase
• Gene Aliases: Apaf3, Casp-9-CTD, Casp9_v1, Ice-Lap6, Mch6
• Chromosome Location: Chr.5: 160356211 - 160373774 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Casp9
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031632.1	NP_113820.1	1 - 2	180		68
GenBank mRNA	AF262319.1	-	1 - 2	180		68
	AF271996.1	-	1 - 2	147		68
	AF286006.1	-	1 - 2	180		68
	AF293333.1	-	1 - 2	180		68
	AF308469.1	-	1 - 2	147		68
	AF517560.1	-	1 - 2	180		68
	AY008275.1	-	1 - 2	147		68
	AY027667.1	-	1 - 2	156		68
	AY124461.1	-	1 - 2	180		68

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500001835.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Apoptosis, Protease, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Casp9

Panther Classification:

Molecular Function -

protease

Gene Ontology Categories:

Process(es)

proteolysis
apoptotic process
activation of cysteine-type endopeptidase activity involved in apoptotic process
cellular response to DNA damage stimulus
aging
intrinsic apoptotic signaling pathway in response to DNA damage
response to UV
response to organic cyclic compound
response to cobalt ion
response to estradiol
response to lipopolysaccharide
glial cell apoptotic process
cellular response to UV
signal transduction in response to DNA damage
positive regulation of apoptotic process
positive regulation of neuron apoptotic process
response to antibiotic
cellular response to organic cyclic compound
cellular response to dexamethasone stimulus
regulation of response to DNA damage stimulus

Function(s)

cysteine-type endopeptidase activity
protein binding
peptidase activity
cysteine-type peptidase activity
SH3 domain binding
protein kinase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20849613	-	-