Rn00581473_m1

• Gene Symbol: Stx6
• Gene Name: syntaxin 6
• Gene Aliases: -
• Chromosome Location: Chr.13: 72804218 - 72850757 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Stx6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031665.2	NP_113853.1	6 - 7	764		142
GenBank mRNA	BC081769.1	-	6 - 7	764	7134641	142
	U56815.1	-	6 - 7	740		142

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1300000524.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Stx6

Panther Classification:

Molecular Function -

SNARE protein

Gene Ontology Categories:

Process(es)

intracellular protein transport
vesicle fusion
endosome organization
vesicle-mediated transport
regulation of protein localization
retrograde transport, endosome to Golgi
Golgi vesicle transport
Golgi ribbon formation

Function(s)

SNAP receptor activity
protein binding
syntaxin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P10076	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	719096	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	294671	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	861094	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	236379	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	87017	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	59289	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	884548	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	696548	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	141647	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	204477	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	452787	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	630097	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	475827	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	85633	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	656046	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	320494	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	564935	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	332377	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	494739	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	499145	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	281110	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	469908	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	34210	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	574699	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	963881	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	936563	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	286190	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	24576	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	757357	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	884682	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	151667	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	99657	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	49709	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	92198	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	10244	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P10076	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P10076	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P10076	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P10076	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P544887	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	33453	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	59	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	19109	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10764806	-	-
Affymetrix Rat Gene 1.0 ST Array	10764804	-	-
Affymetrix Rat Gene 1.0 ST Array	10764801	-	-
Affymetrix Rat Gene 1.0 ST Array	10764803	-	-
Affymetrix Rat Gene 1.0 ST Array	10764802	-	-
Affymetrix Rat Gene 1.0 ST Array	10764810	-	-
Affymetrix Rat Gene 1.0 ST Array	10764805	-	-
Affymetrix Rat Gene 1.0 ST Array	10764799	-	-
Affymetrix Rat Gene 1.0 ST Array	10764809	-	-
Affymetrix Rat Gene 1.0 ST Array	10764807	-	-
Affymetrix Rat Gene 1.0 ST Array	10764800	-	-
Affymetrix Rat Gene 1.1 ST Array	10764798	-	-
Rat Genome 230 2.0 Array	1388556_at	-	-
Rat Genome 230 2.0 Array	1369568_at	-	-
Rat Genome 230 2.0 Array	1388556_PM_at	-	-
Rat Genome 230 2.0 Array	1369568_PM_at	-	-
Affymetrix HT Rat Focus Array	1388556_at	-	-
Affymetrix HT Rat Focus Array	1369568_PM_at	-	-
Affymetrix HT Rat Focus Array	1369568_at	-	-
Affymetrix HT Rat Focus Array	1388556_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1300003628.rn.1	TC1300000524.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300003623.rn.1	TC1300000524.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300003625.rn.1	TC1300000524.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300003627.rn.1	TC1300000524.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300003629.rn.1	TC1300000524.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300003631.rn.1	TC1300000524.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300003630.rn.1	TC1300000524.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300003632.rn.1	TC1300000524.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300003624.rn.1	TC1300000524.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1300003626.rn.1	TC1300000524.rn.1	RTA TC
Rat Expression Set 230	1369568_at	-	-
Rat Expression Set 230	1388556_PM_at	-	-
Rat Expression Set 230	1388556_at	-	-
Rat Expression Set 230	1369568_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10764798	-	-
Rat Genome U34 Set	U56815_at	-	-
Rat Genome U34 Set	rc_AA801183_at	-	-
Rat Genome U34 Set	U56815_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21671756	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1369845	-	-
RatRef-12 Expression BeadChip	ILMN_56462	-	-