Rn00581870_m1 Best Coverage

• Gene Symbol: Htra1
• Gene Name: HtrA serine peptidase 1
• Gene Aliases: Prss11
• Chromosome Location: Chr.1: 201499067 - 201548508 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Htra1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031721.1	NP_113909.1	3 - 4	821		66
GenBank mRNA	AF179370.1	-	3 - 4	821		66
	BC081767.1	-	3 - 4	846	7121959	66
	FQ228942.1	-	2 - 3	299		66

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100002705.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Protease, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Htra1

Panther Classification:

Molecular Function -

serine protease

Gene Ontology Categories:

Process(es)

regulation of cell growth
proteolysis
negative regulation of transforming growth factor beta receptor signaling pathway
negative regulation of BMP signaling pathway
positive regulation of epithelial cell proliferation
negative regulation of defense response to virus
dentinogenesis

Function(s)

serine-type endopeptidase activity
insulin-like growth factor binding
serine-type peptidase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P784614	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	556385	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	967193	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	199442	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	116618	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	826556	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	177566	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	567812	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	306641	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	187732	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	616752	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	857927	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	757335	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	72730	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	280569	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	647813	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	609944	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	490068	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	721529	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	661485	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	852425	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	513911	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	821491	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	655264	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	603792	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	375583	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	663586	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	195864	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	212365	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	804153	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	862896	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	918564	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	595303	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	151016	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	822506	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	551479	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	492804	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	55961	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	924887	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	152568	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	7177	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	75775	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	171142	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	106139	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	128709	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	8271	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	115304	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P784614	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P784614	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P784614	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P784614	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700254054	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	94751	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	29954	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	36594	-	-
Agilent Rat cDNA Microarray (G4105A)	700254054	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10711574	-	-
Affymetrix Rat Gene 1.0 ST Array	10711569	-	-
Affymetrix Rat Gene 1.0 ST Array	10711570	-	-
Affymetrix Rat Gene 1.0 ST Array	10711571	-	-
Affymetrix Rat Gene 1.0 ST Array	10711572	-	-
Affymetrix Rat Gene 1.0 ST Array	10711568	-	-
Affymetrix Rat Gene 1.0 ST Array	10711567	-	-
Affymetrix Rat Gene 1.0 ST Array	10711573	-	-
Affymetrix Rat Gene 1.1 ST Array	10711566	-	-
Rat Genome 230 2.0 Array	1386884_PM_at	-	-
Rat Genome 230 2.0 Array	1386884_at	-	-
Affymetrix HT Rat Focus Array	1386884_at	-	-
Affymetrix HT Rat Focus Array	1386884_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100021281.rn.1	TC0100002705.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100021280.rn.1	TC0100002705.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100021273.rn.1	TC0100002705.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100021275.rn.1	TC0100002705.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100021279.rn.1	TC0100002705.rn.1	RTA TC
Rat Expression Set 230	1386884_at	-	-
Rat Expression Set 230	1386884_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10711566	-	-
Rat Genome U34 Set	rc_AI013705_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21532821	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1349449	-	-
RatRef-12 Expression BeadChip	ILMN_64064	-	-