Rn00582291_m1

Gene Symbol:

Casp6 LOC103689977

Gene Name:

caspase 6

caspase-6

Gene Aliases:

Mch2

-

Chromosome Location:

Chr.2: 235341374 - 235353715 on Build Rnor_6.0

Chromosome Location:

Chr.2: 230186186 - 230198405 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: Casp6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_031775.3	NP_113963.2	2 - 3	205		68
GenBank mRNA	AF025670.1	-	2 - 3	223		68
	BC078785.1	-	2 - 3	170		68

Gene Symbol: LOC103689977
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_006233278.2	XP_006233340.1	2 - 3	233		68
	XM_008761476.1	XP_008759698.1	2 - 3	232		68

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200002137.rn.1

Additional Information:

This assay is in the 5'UTR region of the AF025670.1, BC078785.1, NM_031775.3, XM_006233278.2, XM_008761476.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Casp6
Click here to find siRNAs for Gene LOC103689977

Gene Ontology Categories:

Process(es)

lens development in camera-type eye
acute inflammatory response to non-antigenic stimulus
proteolysis
apoptotic process
response to heat
response to glucose
response to organic substance
response to metal ion
response to iron ion
response to organonitrogen compound
response to gamma radiation
epithelial cell differentiation
response to estradiol
response to testosterone
response to cytokine
response to hydrogen peroxide
positive regulation of apoptotic process
positive regulation of neuron apoptotic process
positive regulation of retinal cell programmed cell death

Function(s)

endopeptidase activity
cysteine-type endopeptidase activity
identical protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0200014842.rn.1	TC0200002137.rn.1	RTA TC