Rn00583977_m1

• Gene Symbol: Ubd
• Gene Name: ubiquitin D
• Gene Aliases: -
• Chromosome Location: Chr.20: 1876175 - 1878126 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ubd
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053299.2	NP_445751.2	1 - 2	80		89
GenBank mRNA	AJ312394.1	-	1 - 2			89

More Information

Additional Information:

This assay is in the 5'UTR region of the AJ312394.1, NM_053299.2 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ubd

Gene Ontology Categories:

Process(es)

ubiquitin-dependent protein catabolic process
response to organonitrogen compound
protein ubiquitination
response to interferon-gamma
response to tumor necrosis factor
myeloid dendritic cell differentiation
positive regulation of apoptotic process
positive regulation of I-kappaB kinase/NF-kappaB signaling
aggresome assembly

Function(s)

molecular_function
proteasome binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P602724	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	338373	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	74709	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P602724	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P602724	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P602724	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P602724	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10830856	-	-
Affymetrix Rat Gene 1.0 ST Array	10830855	-	-
Affymetrix Rat Gene 1.1 ST Array	10830854	-	-
Rat Genome 230 2.0 Array	1368762_PM_at	-	-
Rat Genome 230 2.0 Array	1368762_at	-	-
Affymetrix HT Rat Focus Array	1368762_at	-	-
Affymetrix HT Rat Focus Array	1368762_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR2000007731.rn.1	TC2000000981.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000007733.rn.1	TC2000000981.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR2000007732.rn.1	TC2000000981.rn.1	RTA TC
Rat Expression Set 230	1368762_PM_at	-	-
Rat Expression Set 230	1368762_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10830854	-	-
Rat Genome U34 Set	rc_AI030354_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22189197	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1353912	-	-
RatRef-12 Expression BeadChip	ILMN_59079	-	-