Rn00584023_m1 Best Coverage

• Gene Symbol: Homer3
• Gene Name: homer homolog 3 (Drosophila)
• Gene Aliases: Vesl-3
• Chromosome Location: Chr.16: 20880447 - 20890966 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Homer3
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053310.1	NP_445762.1	5 - 6	590		80
	XM_006252890.2	XP_006252952.1	6 - 7	716		80
	XM_006252891.2	XP_006252953.1	6 - 7	713		80
	XM_008771094.1	XP_008769316.1	6 - 7	714		80
	XM_008771095.1	XP_008769317.1	6 - 7	714		80
GenBank mRNA	AB020879.2	-	5 - 6	590		80

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1600001411.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Homer3

Gene Ontology Categories:

Process(es)

G-protein coupled glutamate receptor signaling pathway
regulation of store-operated calcium entry

Function(s)

protein C-terminus binding
protein domain specific binding
G-protein coupled glutamate receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P463822	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	737613	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	882178	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	868867	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	254743	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	339958	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	147281	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P463822	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P463822	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P463822	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P463822	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	701641312	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	52916	-	-
Agilent Rat cDNA Microarray (G4105A)	701641312	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10791043	-	-
Affymetrix Rat Gene 1.0 ST Array	10791040	-	-
Affymetrix Rat Gene 1.0 ST Array	10791036	-	-
Affymetrix Rat Gene 1.0 ST Array	10791039	-	-
Affymetrix Rat Gene 1.0 ST Array	10791035	-	-
Affymetrix Rat Gene 1.0 ST Array	10791041	-	-
Affymetrix Rat Gene 1.0 ST Array	10791037	-	-
Affymetrix Rat Gene 1.0 ST Array	10791038	-	-
Affymetrix Rat Gene 1.0 ST Array	10791042	-	-
Affymetrix Rat Gene 1.0 ST Array	10791034	-	-
Affymetrix Rat Gene 1.0 ST Array	10791044	-	-
Affymetrix Rat Gene 1.1 ST Array	10791033	-	-
Rat Genome 230 2.0 Array	1385573_PM_at	-	-
Rat Genome 230 2.0 Array	1370212_at	-	-
Rat Genome 230 2.0 Array	1370212_PM_at	-	-
Rat Genome 230 2.0 Array	1385573_at	-	-
Affymetrix HT Rat Focus Array	1370212_at	-	-
Affymetrix HT Rat Focus Array	1385573_PM_at	-	-
Affymetrix HT Rat Focus Array	1370212_PM_at	-	-
Affymetrix HT Rat Focus Array	1385573_at	-	-
Affymetrix Rat Clariom S Assay	PSR1600010855.rn.1	TC1600001411.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1600010854.rn.1	TC1600001411.rn.1	RTA TC
Rat Expression Set 230	1370212_PM_at	-	-
Rat Expression Set 230	1370212_at	-	-
Rat Expression Set 230	1385573_PM_at	-	-
Rat Expression Set 230	1385573_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10791033	-	-
Rat Genome U34 Set	AB020879_at	-	-
Rat Genome U34 Set	rc_AA963155_s_at	-	-
Rat Genome U34 Set	rc_AA925294_g_at	-	-
Rat Genome U34 Set	rc_AA925294_at	-	-
Rat Genome U34 Set	rc_AI103076_s_at	-	-
Rat Genome U34 Set	rc_AI172560_f_at	-	-
Rat Genome U34 Set	rc_AI070797_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21402243	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1365683	-	-
RatRef-12 Expression BeadChip	ILMN_50417	-	-