Rn00585303_m1 Best Coverage

• Gene Symbol: Prdx4
• Gene Name: peroxiredoxin 4
• Gene Aliases: -
• Chromosome Location: Chr.X: 43495457 - 43512994 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Prdx4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053512.2	NP_445964.1	2 - 3	391		86
	XM_006256951.2	XP_006257013.1	2 - 3	556		86
GenBank mRNA	AF106945.1	-	2 - 3	392		86
	BC059122.1	-	2 - 3	475	6918063	86
	FQ219258.1	-	2 - 3	439		86
	FQ220216.1	-	2 - 3	445		86
	FQ220425.1	-	2 - 3	440		86
	FQ228535.1	-	2 - 3	440		86

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0X00000406.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Prdx4

Panther Classification:

Molecular Function -

peroxidase

Gene Ontology Categories:

Process(es)

spermatogenesis
male gonad development
4-hydroxyproline metabolic process
protein maturation by protein folding
extracellular matrix organization
cell redox homeostasis
oxidation-reduction process
reactive oxygen species metabolic process
negative regulation of male germ cell proliferation

Function(s)

peroxidase activity
protein homodimerization activity
peroxiredoxin activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P376502	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	103471	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	560891	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	15401	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	112030	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	686190	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	931535	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	940110	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	958054	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	237540	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	69856	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	89026	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P376502	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P376502	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P376502	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P376502	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700515485	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	33221	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	54038	-	-
Agilent Rat cDNA Microarray (G4105A)	700515485	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10933707	-	-
Affymetrix Rat Gene 1.0 ST Array	10933701	-	-
Affymetrix Rat Gene 1.0 ST Array	10933703	-	-
Affymetrix Rat Gene 1.0 ST Array	10933702	-	-
Affymetrix Rat Gene 1.0 ST Array	10933704	-	-
Affymetrix Rat Gene 1.0 ST Array	10933706	-	-
Affymetrix Rat Gene 1.0 ST Array	10933705	-	-
Affymetrix Rat Gene 1.0 ST Array	10933700	-	-
Affymetrix Rat Gene 1.1 ST Array	10933699	-	-
Rat Genome 230 2.0 Array	1387891_at	-	-
Rat Genome 230 2.0 Array	1387891_PM_at	-	-
Affymetrix HT Rat Focus Array	1387891_PM_at	-	-
Affymetrix HT Rat Focus Array	1387891_at	-	-
Affymetrix Rat Clariom S Assay	PSR0X00002839.rn.1	TC0X00000406.rn.1	RTA TC
Rat Expression Set 230	1387891_PM_at	-	-
Rat Expression Set 230	1387891_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10933699	-	-
Rat Genome U34 Set	rc_AI232900_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21859625	-	-