Rn00585478_m1 Best Coverage

• Gene Symbol: Vamp7
• Gene Name: vesicle-associated membrane protein 7
• Gene Aliases: Sybl1
• Chromosome Location: Chr.12: 18996566 - 19032330 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Vamp7
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053531.1	NP_445983.1	5 - 6	502		93
	XM_006249016.2	XP_006249078.1	6 - 7	655		93
GenBank mRNA	AF281632.1	-	5 - 6	502		93
	FQ228923.1	-	6 - 7	615		93
	FQ230649.1	-	5 - 6	426		93

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200000317.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Vamp7

Panther Classification:

Molecular Function -

SNARE protein

Gene Ontology Categories:

Process(es)

exocytosis
ER to Golgi vesicle-mediated transport
vesicle fusion
phagocytosis, engulfment
endosome to lysosome transport
vesicle-mediated transport
calcium ion regulated exocytosis
triglyceride transport
SNARE complex assembly
Golgi to plasma membrane protein transport
eosinophil degranulation
neutrophil degranulation
natural killer cell degranulation
vesicle transport along microtubule
vesicle fusion with Golgi apparatus
positive regulation of dendrite morphogenesis
autophagosome maturation
regulation of protein targeting to vacuolar membrane
positive regulation of histamine secretion by mast cell

Function(s)

SNAP receptor activity
protein binding
syntaxin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P12839	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	182173	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	163600	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	70321	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	800715	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	139422	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	446369	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	395810	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	177812	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	449613	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	907657	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	677281	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	284471	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	41770	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	87661	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	96955	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	176426	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P12839	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P12839	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P12839	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P12839	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	5043	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	102957	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10760803	-	-
Affymetrix Rat Gene 1.0 ST Array	10760800	-	-
Affymetrix Rat Gene 1.0 ST Array	10760802	-	-
Affymetrix Rat Gene 1.0 ST Array	10760798	-	-
Affymetrix Rat Gene 1.0 ST Array	10760804	-	-
Affymetrix Rat Gene 1.0 ST Array	10760799	-	-
Affymetrix Rat Gene 1.0 ST Array	10760801	-	-
Affymetrix Rat Gene 1.1 ST Array	10760797	-	-
Rat Genome 230 2.0 Array	1370098_at	-	-
Rat Genome 230 2.0 Array	1392903_at	-	-
Rat Genome 230 2.0 Array	1379996_at	-	-
Rat Genome 230 2.0 Array	1379996_PM_at	-	-
Rat Genome 230 2.0 Array	1370098_PM_at	-	-
Rat Genome 230 2.0 Array	1392903_PM_at	-	-
Affymetrix HT Rat Focus Array	1370098_PM_at	-	-
Affymetrix HT Rat Focus Array	1370098_at	-	-
Affymetrix Rat Clariom S Assay	PSR1200002534.rn.1	TC1200000317.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200002536.rn.1	TC1200000317.rn.1	RTA TC
Rat Expression Set 230	1370098_PM_at	-	-
Rat Expression Set 230	1370098_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10760797	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21955106	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1352570	-	-
RatRef-12 Expression BeadChip	ILMN_50581	-	-