Rn00585598_m1 Best Coverage

• Gene Symbol: Vamp5
• Gene Name: vesicle-associated membrane protein 5
• Gene Aliases: -
• Chromosome Location: Chr.4: 100231561 - 100232560 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Vamp5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053555.1	NP_446007.1	1 - 2	142		68
GenBank mRNA	AF054826.1	-	1 - 2	142		68

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400003077.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Vamp5

Gene Ontology Categories:

Process(es)

exocytosis
vesicle fusion
neurotransmitter secretion
skeletal muscle tissue development
cell differentiation
Golgi to plasma membrane protein transport

Function(s)

SNARE binding
SNAP receptor activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P022615	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P022615	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P022615	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P022615	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P170351	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700935883	-	-
Agilent Rat cDNA Microarray (G4105A)	700935883	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10863217	-	-
Affymetrix Rat Gene 1.0 ST Array	10863216	-	-
Affymetrix Rat Gene 1.1 ST Array	10863215	-	-
Rat Genome 230 2.0 Array	1377989_at	-	-
Rat Genome 230 2.0 Array	1375737_at	-	-
Rat Genome 230 2.0 Array	1377989_PM_at	-	-
Rat Genome 230 2.0 Array	1375737_PM_at	-	-
Rat Genome 230 2.0 Array	1398840_PM_at	-	-
Rat Genome 230 2.0 Array	1398840_at	-	-
Affymetrix HT Rat Focus Array	1398840_at	-	-
Affymetrix HT Rat Focus Array	1398840_PM_at	-	-
Affymetrix HT Rat Focus Array	1375737_at	-	-
Affymetrix HT Rat Focus Array	1375737_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0400021806.rn.1	TC0400003077.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400021807.rn.1	TC0400003077.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0400021809.rn.1	TC0400003077.rn.1	RTA TC
Rat Expression Set 230	1375737_at	-	-
Rat Expression Set 230	1375737_PM_at	-	-
Rat Expression Set 230	1398840_at	-	-
Rat Expression Set 230	1398840_PM_at	-	-
Rat Expression Set 230	1377989_PM_at	-	-
Rat Expression Set 230	1377989_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10863215	-	-
Rat Genome U34 Set	rc_AA859473_at	-	-
Rat Genome U34 Set	AF054826_at	-	-
Rat Genome U34 Set	rc_AA924748_g_at	-	-
Rat Genome U34 Set	rc_AA924748_at	-	-
Rat Genome U34 Set	rc_AI102799_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21157555	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1349299	-	-
RatRef-12 Expression BeadChip	ILMN_58004	-	-