Rn00585886_m1 Best Coverage

• Gene Symbol: Psmb1
• Gene Name: proteasome (prosome, macropain) subunit, beta type 1
• Gene Aliases: -
• Chromosome Location: Chr.1: 57470878 - 57491359 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Psmb1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053590.1	NP_446042.1	1 - 2	122		87
	XM_006227981.1	XP_006228043.1	3 - 4	377		87
GenBank mRNA	BC058455.1	-	1 - 2	134	6922317	87
	FQ211516.1	-	1 - 2	137		87
	FQ214442.1	-	1 - 2	137		87
	FQ214726.1	-	3 - 4	377		87
	FQ225328.1	-	1 - 2	137		87
	FQ229756.1	-	1 - 2	137		87
	FQ230094.1	-	1 - 2	137		87
	X52783.1	-	1 - 2	122		87

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100004575.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Protease, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Psmb1

Panther Classification:

Molecular Function -

protease

Gene Ontology Categories:

Process(es)

proteolysis involved in cellular protein catabolic process

Function(s)

threonine-type endopeptidase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P130559	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	101301	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	442739	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	405415	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	938639	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	346210	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	448478	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	475102	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	497622	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	565541	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	186796	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	292133	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	809139	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	246803	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	881760	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	401392	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	52790	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	113339	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P130559	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P130559	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P130559	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P130559	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	87562	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10718299	-	-
Affymetrix Rat Gene 1.0 ST Array	10718300	-	-
Affymetrix Rat Gene 1.0 ST Array	10718302	-	-
Affymetrix Rat Gene 1.0 ST Array	10718298	-	-
Affymetrix Rat Gene 1.0 ST Array	10718301	-	-
Affymetrix Rat Gene 1.0 ST Array	10718297	-	-
Affymetrix Rat Gene 1.1 ST Array	10718296	-	-
Rat Genome 230 2.0 Array	1398812_PM_at	-	-
Rat Genome 230 2.0 Array	1398812_at	-	-
Affymetrix HT Rat Focus Array	1398812_at	-	-
Affymetrix HT Rat Focus Array	1398812_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100036236.rn.1	TC0100004575.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100036239.rn.1	TC0100004575.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100036240.rn.1	TC0100004575.rn.1	RTA TC
Rat Expression Set 230	1398812_at	-	-
Rat Expression Set 230	1398812_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10718296	-	-
Rat Genome U34 Set	rc_AA849722_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21963055	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1357406	-	-
RatRef-12 Expression BeadChip	ILMN_66471	-	-