Rn00586231_m1 Best Coverage

• Gene Symbol: Fcnb
• Gene Name: ficolin B
• Gene Aliases: Fcn2
• Chromosome Location: Chr.3: 6617816 - 6626193 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Fcnb
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053634.1	NP_446086.1	7 - 8	603		131
GenBank mRNA	AB036792.1	-	7 - 8	603		131
	BC088123.1	-	7 - 8	595		131
	FQ220557.1	-	7 - 8	606		131

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300002774.rn.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Fcnb

Gene Ontology Categories:

Process(es)

complement activation, lectin pathway
cell surface pattern recognition receptor signaling pathway
G protein-coupled receptor signaling pathway
positive regulation of interleukin-8 production
protein localization to cell surface
recognition of apoptotic cell
negative regulation of viral entry into host cell

Function(s)

G protein-coupled receptor binding
carbohydrate binding
sialic acid binding
pattern recognition receptor activity
carbohydrate derivative binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P527724	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	908670	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	472446	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	636136	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	453278	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	287137	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	163180	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	151605	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P527724	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P527724	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P527724	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P527724	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	99453	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10844007	-	-
Affymetrix Rat Gene 1.0 ST Array	10844010	-	-
Affymetrix Rat Gene 1.0 ST Array	10844013	-	-
Affymetrix Rat Gene 1.0 ST Array	10844014	-	-
Affymetrix Rat Gene 1.0 ST Array	10844008	-	-
Affymetrix Rat Gene 1.0 ST Array	10844011	-	-
Affymetrix Rat Gene 1.0 ST Array	10844006	-	-
Affymetrix Rat Gene 1.0 ST Array	10844009	-	-
Affymetrix Rat Gene 1.0 ST Array	10844012	-	-
Affymetrix Rat Gene 1.1 ST Array	10844005	-	-
Rat Genome 230 2.0 Array	1387378_at	-	-
Rat Genome 230 2.0 Array	1387378_PM_at	-	-
Affymetrix HT Rat Focus Array	1387378_PM_at	-	-
Affymetrix HT Rat Focus Array	1387378_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300021105.rn.1	TC0300002774.rn.1	RTA TC
Rat Expression Set 230	1387378_at	-	-
Rat Expression Set 230	1387378_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10844005	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21968384	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1351900	-	-
RatRef-12 Expression BeadChip	ILMN_66379	-	-