Rn00586403_m1 Best Coverage

• Gene Symbol: Cxcl2
• Gene Name: chemokine (C-X-C motif) ligand 2
• Gene Aliases: Mip-2, Scyb2
• Chromosome Location: Chr.14: 18731346 - 18733391 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cxcl2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053647.1	NP_446099.1	3 - 4	354		85
GenBank mRNA	AB060092.1	-	3 - 4	354		85
	S77604.1	-	3 - 4	309		85
	U45965.1	-	3 - 4	317		85
	X65647.1	-	3 - 4	294		85

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1400001503.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Recommended Assay, Rattus norvegicus, Rat Chemokine Panel, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cxcl2

Panther Classification:

Molecular Function -

chemokine

Gene Ontology Categories:

Process(es)

response to amphetamine
response to molecule of bacterial origin
positive regulation of leukocyte chemotaxis
inflammatory response
immune response
G-protein coupled receptor signaling pathway
positive regulation of cytosolic calcium ion concentration
response to heat
response to gamma radiation
neutrophil chemotaxis
leukocyte chemotaxis
response to estradiol
wound healing
regulation of cell proliferation
response to glucocorticoid
chemokine-mediated signaling pathway
neuron death
cellular response to lipopolysaccharide
cellular response to interleukin-1

Function(s)

chemokine activity
CXCR chemokine receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P140437	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	433911	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	923764	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	142578	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P140437	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P140437	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P140437	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P515197	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	47825	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	39133	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	77918	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10775898	-	-
Affymetrix Rat Gene 1.0 ST Array	10775899	-	-
Affymetrix Rat Gene 1.0 ST Array	10775897	-	-
Affymetrix Rat Gene 1.1 ST Array	10775896	-	-
Rat Genome 230 2.0 Array	1368760_PM_at	-	-
Rat Genome 230 2.0 Array	1368760_at	-	-
Affymetrix HT Rat Focus Array	1368760_at	-	-
Affymetrix HT Rat Focus Array	1368760_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1400011046.rn.1	TC1400001503.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1400011047.rn.1	TC1400001503.rn.1	RTA TC
Rat Expression Set 230	1368760_at	-	-
Rat Expression Set 230	1368760_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10775896	-	-
Rat Genome U34 Set	U45965_at	-	-
Rat Genome U34 Set	U45965_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20807096	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1352133	-	-
RatRef-12 Expression BeadChip	ILMN_65741	-	-