Rn00586556_m1 Best Coverage

• Gene Symbol: Akap1
• Gene Name: A kinase (PRKA) anchor protein 1
• Gene Aliases: Akap84
• Chromosome Location: Chr.10: 76151013 - 76183987 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Akap1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053665.1	NP_446117.1	1 - 2	1572		75
	XM_006247067.2	XP_006247129.1	2 - 3	1745		75
	XM_006247068.1	XP_006247130.1	2 - 3	1741		75
	XM_008767930.1	XP_008766152.1	2 - 3	1800		75
GenBank mRNA	AF068202.1	-	1 - 2	1572		75

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000003520.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Akap1

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Process(es)

negative regulation of cardiac muscle hypertrophy
regulation of protein kinase A signaling
phosphorylation
negative regulation of protein dephosphorylation
negative regulation of NFAT protein import into nucleus
cellular response to cAMP
cellular response to peptide hormone stimulus

Function(s)

RNA binding
microtubule binding
kinase activity
protein kinase binding
protein phosphatase binding
protein domain specific binding
protein phosphatase 2B binding
protein complex scaffold
protein kinase A regulatory subunit binding
poly(A) RNA binding
beta-tubulin binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P009540	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P561324	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P12890	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	178681	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	781890	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	556947	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	10989	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	759027	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	266716	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	297053	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	46882	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	283716	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	60553	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	169592	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P009540	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P561324	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P12890	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P009540	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P12890	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P561324	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P12890	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P009540	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P561324	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P12890	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P561324	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	60048	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	101770	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10746134	-	-
Affymetrix Rat Gene 1.0 ST Array	10746133	-	-
Affymetrix Rat Gene 1.0 ST Array	10746125	-	-
Affymetrix Rat Gene 1.0 ST Array	10746127	-	-
Affymetrix Rat Gene 1.0 ST Array	10746126	-	-
Affymetrix Rat Gene 1.0 ST Array	10746129	-	-
Affymetrix Rat Gene 1.0 ST Array	10746132	-	-
Affymetrix Rat Gene 1.0 ST Array	10746130	-	-
Affymetrix Rat Gene 1.0 ST Array	10746135	-	-
Affymetrix Rat Gene 1.0 ST Array	10746123	-	-
Affymetrix Rat Gene 1.0 ST Array	10746128	-	-
Affymetrix Rat Gene 1.0 ST Array	10746131	-	-
Affymetrix Rat Gene 1.0 ST Array	10746124	-	-
Affymetrix Rat Gene 1.1 ST Array	10746122	-	-
Rat Genome 230 2.0 Array	1388070_a_at	-	-
Rat Genome 230 2.0 Array	1383358_PM_at	-	-
Rat Genome 230 2.0 Array	1383358_at	-	-
Rat Genome 230 2.0 Array	1369069_at	-	-
Rat Genome 230 2.0 Array	1369069_PM_at	-	-
Rat Genome 230 2.0 Array	1388070_PM_a_at	-	-
Affymetrix HT Rat Focus Array	1383358_PM_at	-	-
Affymetrix HT Rat Focus Array	1388070_a_at	-	-
Affymetrix HT Rat Focus Array	1369069_PM_at	-	-
Affymetrix HT Rat Focus Array	1383358_at	-	-
Affymetrix HT Rat Focus Array	1369069_at	-	-
Affymetrix HT Rat Focus Array	1388070_PM_a_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000031475.rn.1	TC1000003520.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000031481.rn.1	TC1000003520.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000031482.rn.1	TC1000003520.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000031480.rn.1	TC1000003520.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000031483.rn.1	TC1000003520.rn.1	RTA TC
Rat Expression Set 230	1369069_PM_at	-	-
Rat Expression Set 230	1388070_a_at	-	-
Rat Expression Set 230	1369069_at	-	-
Rat Expression Set 230	1388070_PM_a_at	-	-
Rat Expression Set 230	1383358_PM_at	-	-
Rat Expression Set 230	1383358_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10746122	-	-
Rat Genome U34 Set	AF092523_s_at	-	-
Rat Genome U34 Set	AF092523_i_at	-	-
Rat Genome U34 Set	AF068202_at	-	-
Rat Genome U34 Set	AF092523_r_at	-	-
Rat Genome U34 Set	rc_AI029174_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21270267	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1366414	-	-
RatRef-12 Expression BeadChip	ILMN_57354	-	-