Rn00586628_m1 Best Coverage

• Gene Symbol: Dffa
• Gene Name: DNA fragmentation factor, alpha subunit
• Gene Aliases: ICAD-S
• Chromosome Location: Chr.5: 165922902 - 165935822 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Dffa
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053679.2	NP_446131.2	1 - 2	205		67
	XM_006239362.2	XP_006239424.1	1 - 2	226		67
GenBank mRNA	AF136601.1	-	1 - 2	190		67
	BC100067.1	-	1 - 2	205		67

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500001922.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Dffa

Gene Ontology Categories:

Process(es)

positive regulation of apoptotic process
thymocyte apoptotic process
negative regulation of execution phase of apoptosis
negative regulation of apoptotic DNA fragmentation

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P479802	-	-
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P039362	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	196982	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	868709	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	132037	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	590951	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	194068	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	249269	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	592163	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	398451	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	112341	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P479802	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P039362	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P479802	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P039362	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P039362	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P479802	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P525020	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P543374	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	83861	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	57781	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10874077	-	-
Affymetrix Rat Gene 1.0 ST Array	10874079	-	-
Affymetrix Rat Gene 1.0 ST Array	10874076	-	-
Affymetrix Rat Gene 1.0 ST Array	10874073	-	-
Affymetrix Rat Gene 1.0 ST Array	10874072	-	-
Affymetrix Rat Gene 1.0 ST Array	10874074	-	-
Affymetrix Rat Gene 1.0 ST Array	10874078	-	-
Affymetrix Rat Gene 1.0 ST Array	10874075	-	-
Affymetrix Rat Gene 1.0 ST Array	10874071	-	-
Affymetrix Rat Gene 1.1 ST Array	10874070	-	-
Rat Genome 230 2.0 Array	1389195_at	-	-
Rat Genome 230 2.0 Array	1369082_PM_at	-	-
Rat Genome 230 2.0 Array	1389195_PM_at	-	-
Rat Genome 230 2.0 Array	1369082_at	-	-
Affymetrix HT Rat Focus Array	1389195_at	-	-
Affymetrix HT Rat Focus Array	1389195_PM_at	-	-
Affymetrix HT Rat Focus Array	1369082_PM_at	-	-
Affymetrix HT Rat Focus Array	1369082_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500014464.rn.1	TC0500001922.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500014465.rn.1	TC0500001922.rn.1	RTA TC
Rat Expression Set 230	1369082_PM_at	-	-
Rat Expression Set 230	1389195_at	-	-
Rat Expression Set 230	1389195_PM_at	-	-
Rat Expression Set 230	1369082_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10874070	-	-
Rat Genome U34 Set	rc_AI236726_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21411143	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1367916	-	-
RatRef-12 Expression BeadChip	ILMN_55240	-	-