Rn00587437_m1 Best Coverage

• Gene Symbol: Txn1
• Gene Name: thioredoxin 1
• Gene Aliases: Txn
• Chromosome Location: Chr.5: 75049735 - 75057731 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Txn1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053800.3	NP_446252.1	2 - 3	193		68
GenBank mRNA	AF311055.1	-	2 - 3	193		68
	BC058454.1	-		278	6886988	68
	FQ209943.1	-		275		68
	FQ216849.1	-		304		68
	FQ217822.1	-		273		68
	FQ221646.1	-		246		68
	X14878.1	-		253		68

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500002825.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Txn1

Panther Classification:

Molecular Function -

oxidoreductase

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
regulation of transcription, DNA-templated
glycerol ether metabolic process
response to radiation
response to selenium ion
response to activity
positive regulation of peptidyl-serine phosphorylation
regulation of protein import into nucleus, translocation
cellular response to drug
response to drug
positive regulation of DNA binding
cell redox homeostasis
negative regulation of protein export from nucleus
response to axon injury
oxidation-reduction process
cellular response to antibiotic
cellular response to glucose stimulus
cellular response to hyperoxia
response to dexamethasone
response to thyroxine
negative regulation of hydrogen peroxide-induced cell death

Function(s)

thioredoxin-disulfide reductase activity
protein disulfide oxidoreductase activity
peptide disulfide oxidoreductase activity
enzyme binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P689013	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	136702	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	28422	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	949087	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	345796	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	930072	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	54095	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	539826	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	661259	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	881205	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	24884	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	161210	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	12020	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P689013	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P689013	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P689013	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P689013	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700145130	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	36505	-	-
Agilent Rat cDNA Microarray (G4105A)	700145130	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10877007	-	-
Affymetrix Rat Gene 1.0 ST Array	10877010	-	-
Affymetrix Rat Gene 1.0 ST Array	10877009	-	-
Affymetrix Rat Gene 1.0 ST Array	10877008	-	-
Affymetrix Rat Gene 1.0 ST Array	10877011	-	-
Affymetrix Rat Gene 1.0 ST Array	10877012	-	-
Affymetrix Rat Gene 1.1 ST Array	10877005	-	-
Rat Genome 230 2.0 Array	1398839_at	-	-
Rat Genome 230 2.0 Array	1398839_PM_at	-	-
Affymetrix HT Rat Focus Array	1398839_at	-	-
Affymetrix HT Rat Focus Array	1398839_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500020862.rn.1	TC0500002825.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500020865.rn.1	TC0500002825.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500020866.rn.1	TC0500002825.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500020863.rn.1	TC0500002825.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500020868.rn.1	TC0500002825.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500020864.rn.1	TC0500002825.rn.1	RTA TC
Rat Expression Set 230	1398839_PM_at	-	-
Rat Expression Set 230	1398839_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10877005	-	-
Rat Genome U34 Set	rc_AA944316_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21986484	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1371958	-	-
Illumina ratRef-12 v1.0 expression beadchip	ILMN_2038784	-	-
Illumina ratRef-12 v1.0 expression beadchip	ILMN_2038783	-	-
RatRef-12 Expression BeadChip	ILMN_60131	-	-