Rn00587579_g1 Best Coverage

• Gene Symbol: S100a8
• Gene Name: S100 calcium binding protein A8
• Gene Aliases: Mrp8
• Chromosome Location: Chr.2: 190073242 - 190074333 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: S100a8
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053822.2	NP_446274.2	1 - 2	160		91
	XM_006232565.2	XP_006232627.1	2 - 3	260		91
GenBank mRNA	L18891.1	-	1 - 2	166		91

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200001622.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene S100a8

Panther Classification:

Molecular Function -

calmodulin-related

Gene Ontology Categories:

Process(es)

leukocyte migration involved in inflammatory response
acute inflammatory response
chronic inflammatory response
positive regulation of peptide secretion
autophagy
activation of cysteine-type endopeptidase activity involved in apoptotic process
inflammatory response
response to zinc ion
neutrophil chemotaxis
response to lipopolysaccharide
wound healing
innate immune response
response to ethanol
positive regulation of inflammatory response
neutrophil aggregation
positive regulation of intrinsic apoptotic signaling pathway

Function(s)

molecular_function
calcium ion binding
microtubule binding
zinc ion binding
antioxidant activity
Toll-like receptor 4 binding
arachidonic acid binding
RAGE receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P1055780	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	718295	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1055780	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1055780	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P1055780	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P674708	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1055780	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P674704	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700293002	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	66783	-	-
Agilent Rat cDNA Microarray (G4105A)	700293002	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10817073	-	-
Affymetrix Rat Gene 1.0 ST Array	10817072	-	-
Affymetrix Rat Gene 1.1 ST Array	10817071	-	-
Rat Genome 230 2.0 Array	1368494_PM_at	-	-
Rat Genome 230 2.0 Array	1368494_at	-	-
Affymetrix HT Rat Focus Array	1368494_PM_at	-	-
Affymetrix HT Rat Focus Array	1368494_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200010892.rn.1	TC0200001622.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200010891.rn.1	TC0200001622.rn.1	RTA TC
Rat Expression Set 230	1368494_at	-	-
Rat Expression Set 230	1368494_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10817071	-	-
Rat Genome U34 Set	rc_AA957003_at	-	-
Rat Genome U34 Set	rc_AI030647_at	-	-
Rat Genome U34 Set	rc_AI043654_f_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21780452	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1350690	-	-
RatRef-12 Expression BeadChip	ILMN_68068	-	-