Rn00588069_m1 Best Coverage

• Gene Symbol: Jdp2
• Gene Name: Jun dimerization protein 2
• Gene Aliases: Jundm2, Jundp2
• Chromosome Location: Chr.6: 109464908 - 109505440 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Jdp2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053894.1	NP_446346.1	1 - 2	468		74
	XM_008764734.1	XP_008762956.1	2 - 3	1038		74
	XM_008764735.1	XP_008762957.1	2 - 3	365		74
GenBank mRNA	U53449.1	-	1 - 2	468		74

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0600003484.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Jdp2

Panther Classification:

Molecular Function -

basic leucine zipper transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
transcription from RNA polymerase II promoter
positive regulation of histone deacetylation
negative regulation of fat cell differentiation

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
chromatin binding
double-stranded DNA binding
transcription factor activity, sequence-specific DNA binding
sequence-specific DNA binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P508466	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	127253	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	441410	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	249852	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	930605	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	231770	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	558959	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	757857	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	530353	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	849811	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	754871	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	371188	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	784740	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	8261	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	207927	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	608770	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	570894	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	348949	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	686251	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	163413	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	8158	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	276808	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	166240	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	33	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	63523	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P508466	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P508466	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P508466	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P508466	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	55886	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	298	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10886039	-	-
Affymetrix Rat Gene 1.0 ST Array	10886037	-	-
Affymetrix Rat Gene 1.0 ST Array	10886038	-	-
Affymetrix Rat Gene 1.1 ST Array	10886036	-	-
Rat Genome 230 2.0 Array	1369583_at	-	-
Rat Genome 230 2.0 Array	1372986_PM_at	-	-
Rat Genome 230 2.0 Array	1372986_at	-	-
Rat Genome 230 2.0 Array	1369583_PM_at	-	-
Affymetrix HT Rat Focus Array	1372986_PM_at	-	-
Affymetrix HT Rat Focus Array	1372986_at	-	-
Affymetrix HT Rat Focus Array	1369583_at	-	-
Affymetrix HT Rat Focus Array	1369583_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0600024457.rn.1	TC0600003484.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0600024458.rn.1	TC0600003484.rn.1	RTA TC
Rat Expression Set 230	1369583_PM_at	-	-
Rat Expression Set 230	1372986_at	-	-
Rat Expression Set 230	1369583_at	-	-
Rat Expression Set 230	1372986_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10886036	-	-
Rat Genome U34 Set	U53449_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21192056	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1371286	-	-
RatRef-12 Expression BeadChip	ILMN_62201	-	-