Rn00589097_m1 Best Coverage

• Gene Symbol: Nudt1
• Gene Name: nudix (nucleoside diphosphate linked moiety X)-type motif 1
• Gene Aliases: Mth1
• Chromosome Location: Chr.12: 16391578 - 16398746 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Nudt1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_057120.1	NP_476461.1	2 - 3	311		78
	XM_006248911.2	XP_006248973.1	3 - 4	362		78
GenBank mRNA	D49977.1	-	2 - 3	311		78

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1200001179.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, 3' Most, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nudt1

Panther Classification:

Molecular Function -

hydrolase, phosphatase, metabolite interconversion enzyme

Gene Ontology Categories:

Process(es)

purine nucleotide catabolic process
dGTP catabolic process
DNA repair
DNA protection
dATP catabolic process

Function(s)

8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
snoRNA binding
8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity
GTP diphosphatase activity
metal ion binding
ATP diphosphatase activity
m7G(5')pppN diphosphatase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P267068	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	493513	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	939000	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	758525	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P267068	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P267068	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P267068	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P267068	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	702145251	-	-
Agilent Rat cDNA Microarray (G4105A)	702145251	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10760643	-	-
Affymetrix Rat Gene 1.0 ST Array	10760641	-	-
Affymetrix Rat Gene 1.0 ST Array	10760640	-	-
Affymetrix Rat Gene 1.0 ST Array	10760642	-	-
Affymetrix Rat Gene 1.1 ST Array	10760639	-	-
Rat Genome 230 2.0 Array	1368917_at	-	-
Rat Genome 230 2.0 Array	1368917_PM_at	-	-
Affymetrix HT Rat Focus Array	1368917_at	-	-
Affymetrix HT Rat Focus Array	1368917_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1200010048.rn.1	TC1200001179.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200010049.rn.1	TC1200001179.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200010047.rn.1	TC1200001179.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1200010050.rn.1	TC1200001179.rn.1	RTA TC
Rat Expression Set 230	1368917_PM_at	-	-
Rat Expression Set 230	1368917_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10760639	-	-
Rat Genome U34 Set	D49980_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22176570	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1360956	-	-
RatRef-12 Expression BeadChip	ILMN_50749	-	-