Rn00589325_m1 Best Coverage

• Gene Symbol: Chrna6
• Gene Name: cholinergic receptor, nicotinic, alpha 6 (neuronal)
• Gene Aliases: -
• Chromosome Location: Chr.16: 68860018 - 68866718 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Chrna6
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_057184.1	NP_476532.1	1 - 2	262		94
GenBank mRNA	L08227.1	-	1 - 2	262		94

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1600000769.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Ion Channel, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Chrna6

Panther Classification:

Molecular Function -

ligand-gated ion channel

Gene Ontology Categories:

Process(es)

regulation of dopamine secretion
positive regulation of dopamine secretion
protein heterooligomerization
membrane depolarization
cation transmembrane transport

Function(s)

acetylcholine-activated cation-selective channel activity
drug binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P165996	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	534045	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	812185	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	769789	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	779671	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	972934	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	21102	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P165996	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P165996	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P165996	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P389008	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	84763	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10788703	-	-
Affymetrix Rat Gene 1.0 ST Array	10788706	-	-
Affymetrix Rat Gene 1.0 ST Array	10788704	-	-
Affymetrix Rat Gene 1.0 ST Array	10788701	-	-
Affymetrix Rat Gene 1.0 ST Array	10788705	-	-
Affymetrix Rat Gene 1.0 ST Array	10788700	-	-
Affymetrix Rat Gene 1.0 ST Array	10788702	-	-
Affymetrix Rat Gene 1.1 ST Array	10788699	-	-
Rat Genome 230 2.0 Array	1369845_PM_at	-	-
Rat Genome 230 2.0 Array	1369845_at	-	-
Affymetrix HT Rat Focus Array	1369845_at	-	-
Affymetrix HT Rat Focus Array	1369845_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1600005823.rn.1	TC1600000769.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1600005824.rn.1	TC1600000769.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1600005825.rn.1	TC1600000769.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1600005821.rn.1	TC1600000769.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1600005822.rn.1	TC1600000769.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1600005826.rn.1	TC1600000769.rn.1	RTA TC
Rat Expression Set 230	1369845_PM_at	-	-
Rat Expression Set 230	1369845_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10788699	-	-
Rat Genome U34 Set	L08227_at	-	-
Rat Genome U34 Set	L08227_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22176349	-	-