Rn00589512_m1 Best Coverage

• Gene Symbol: Atp6v1b2
• Gene Name: ATPase, H transporting, lysosomal V1 subunit B2
• Gene Aliases: Atp6b1b2, Atp6b2, Vatb
• Chromosome Location: Chr.16: 22326537 - 22350143 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Atp6v1b2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_057213.2	NP_476561.1	1 - 2	144		66
GenBank mRNA	BC085714.1	-	1 - 2	144	7109340	66
	FQ232688.1	-	1 - 2	152		66
	Y12635.1	-	1 - 2	145		66

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1600001443.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Ion Channel, Transporter, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Atp6v1b2

Panther Classification:

Molecular Function -

ATP synthase

Gene Ontology Categories:

Process(es)

vacuolar acidification
ATP hydrolysis coupled proton transport
regulation of cellular pH
ATP metabolic process

Function(s)

ATP binding
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P257221	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	468287	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	829997	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	467778	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	800103	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	112727	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	687664	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	1168	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	599021	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	503704	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	481674	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	272122	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	224232	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	241573	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	420825	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	754095	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	632677	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	563842	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	9223	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	157674	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	110031	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P257221	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P257221	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P257221	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P149114	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P257221	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700494477	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	67900	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	41058	-	-
Agilent Rat cDNA Microarray (G4105A)	700494477	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10791235	-	-
Affymetrix Rat Gene 1.0 ST Array	10791238	-	-
Affymetrix Rat Gene 1.0 ST Array	10791247	-	-
Affymetrix Rat Gene 1.0 ST Array	10791243	-	-
Affymetrix Rat Gene 1.0 ST Array	10791245	-	-
Affymetrix Rat Gene 1.0 ST Array	10791241	-	-
Affymetrix Rat Gene 1.0 ST Array	10791237	-	-
Affymetrix Rat Gene 1.0 ST Array	10791244	-	-
Affymetrix Rat Gene 1.0 ST Array	10791246	-	-
Affymetrix Rat Gene 1.0 ST Array	10791242	-	-
Affymetrix Rat Gene 1.0 ST Array	10791236	-	-
Affymetrix Rat Gene 1.0 ST Array	10791239	-	-
Affymetrix Rat Gene 1.0 ST Array	10791234	-	-
Affymetrix Rat Gene 1.0 ST Array	10791240	-	-
Affymetrix Rat Gene 1.1 ST Array	10791233	-	-
Rat Genome 230 2.0 Array	1387664_PM_at	-	-
Rat Genome 230 2.0 Array	1371402_PM_at	-	-
Rat Genome 230 2.0 Array	1387664_at	-	-
Rat Genome 230 2.0 Array	1371402_at	-	-
Affymetrix HT Rat Focus Array	1387664_PM_at	-	-
Affymetrix HT Rat Focus Array	1371402_PM_at	-	-
Affymetrix HT Rat Focus Array	1387664_at	-	-
Affymetrix HT Rat Focus Array	1371402_at	-	-
Affymetrix Rat Clariom S Assay	PSR1600011239.rn.1	TC1600001443.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1600011238.rn.1	TC1600001443.rn.1	RTA TC
Rat Expression Set 230	1387664_PM_at	-	-
Rat Expression Set 230	1371402_PM_at	-	-
Rat Expression Set 230	1371402_at	-	-
Rat Expression Set 230	1387664_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10791233	-	-
Rat Genome U34 Set	Y12635_at	-	-
Rat Genome U34 Set	rc_AI227667_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21928553	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1360084	-	-
RatRef-12 Expression BeadChip	ILMN_65995	-	-