Rn00589656_m1 Best Coverage

• Gene Symbol: Chst10
• Gene Name: carbohydrate sulfotransferase 10
• Gene Aliases: Hnk-1st
• Chromosome Location: Chr.9: 45528928 - 45559184 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Chst10
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_080397.1	NP_536322.1	3 - 4	448		75
	XM_006244730.2	XP_006244792.1	4 - 5	597		75
	XM_006244732.2	XP_006244794.1	3 - 4	255		75
	XM_008766985.1	XP_008765207.1	3 - 4	379		75
	XM_008766987.1	XP_008765209.1	3 - 4	349		75
GenBank mRNA	AF022729.1	-	3 - 4	448		75

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0900001872.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Chst10

Panther Classification:

Molecular Function -

transferase, metabolite interconversion enzyme

Gene Ontology Categories:

Process(es)

learning
long-term memory
carbohydrate biosynthetic process

Function(s)

sulfotransferase activity
HNK-1 sulfotransferase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P510135	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	501756	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	626135	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	296242	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	960323	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	444165	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	777867	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	258957	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	82496	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	946276	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	310047	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	249863	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	732269	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	64420	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	240480	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	405938	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	418568	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	471181	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	166507	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	854201	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	390453	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	929118	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	20747	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	89482	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	69505	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	33306	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P510135	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P510135	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P510135	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P510135	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	52829	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	65145	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10927607	-	-
Affymetrix Rat Gene 1.0 ST Array	10927609	-	-
Affymetrix Rat Gene 1.0 ST Array	10927606	-	-
Affymetrix Rat Gene 1.0 ST Array	10927608	-	-
Affymetrix Rat Gene 1.0 ST Array	10927605	-	-
Affymetrix Rat Gene 1.0 ST Array	10927604	-	-
Affymetrix Rat Gene 1.1 ST Array	10927603	-	-
Rat Genome 230 2.0 Array	1367944_at	-	-
Rat Genome 230 2.0 Array	1367944_PM_at	-	-
Affymetrix HT Rat Focus Array	1367944_at	-	-
Affymetrix HT Rat Focus Array	1367944_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0900015424.rn.1	TC0900001872.rn.1	RTA TC
Rat Expression Set 230	1367944_at	-	-
Rat Expression Set 230	1367944_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10927603	-	-
Rat Genome U34 Set	AF022729_at	-	-
Rat Genome U34 Set	AF022729_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21854066	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1368596	-	-
RatRef-12 Expression BeadChip	ILMN_65556	-	-