Rn00590266_m1 Best Coverage

• Gene Symbol: Pdzk1ip1
• Gene Name: PDZK1 interacting protein 1
• Gene Aliases: Dd96, Map17
• Chromosome Location: Chr.5: 133895748 - 133900720 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pdzk1ip1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_130401.1	NP_569085.1	2 - 3	283		72
	XM_006238620.2	XP_006238682.1	3 - 4	304		72
	XM_008763968.1	XP_008762190.1	3 - 4	476		72
	XM_008763969.1	XP_008762191.1	3 - 4	304		72
	XM_008763970.1	XP_008762192.1	3 - 4	289		72
GenBank mRNA	AF402772.1	-	2 - 3	283		72

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500001236.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pdzk1ip1

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P414299	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	21561	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	251759	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	424273	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	458972	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	180854	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P414299	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P414299	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P414299	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P414299	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	702130141	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	7282	-	-
Agilent Rat cDNA Microarray (G4105A)	702130141	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10871079	-	-
Affymetrix Rat Gene 1.0 ST Array	10871077	-	-
Affymetrix Rat Gene 1.0 ST Array	10871080	-	-
Affymetrix Rat Gene 1.0 ST Array	10871078	-	-
Affymetrix Rat Gene 1.1 ST Array	10871076	-	-
Rat Genome 230 2.0 Array	1368209_at	-	-
Rat Genome 230 2.0 Array	1368209_PM_at	-	-
Affymetrix HT Rat Focus Array	1368209_PM_at	-	-
Affymetrix HT Rat Focus Array	1368209_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500008431.rn.1	TC0500001236.rn.1	RTA TC
Rat Expression Set 230	1368209_PM_at	-	-
Rat Expression Set 230	1368209_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10871076	-	-
Rat Genome U34 Set	rc_AA892264_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21283841	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1352044	-	-
RatRef-12 Expression BeadChip	ILMN_59242	-	-