Rn00590612_m1 Best Coverage

• Gene Symbol: Lcn2
• Gene Name: lipocalin 2
• Gene Aliases: Sip24
• Chromosome Location: Chr.3: 11414189 - 11417534 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Lcn2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_130741.1	NP_570097.1	2 - 3	320		88
GenBank mRNA	BC089053.1	-	2 - 3	382	7310185	88
	X13295.1	-	2 - 3	320		88

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300002875.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Lcn2

Panther Classification:

Molecular Function -

transfer/carrier protein

Gene Ontology Categories:

Process(es)

ion transport
response to oxidative stress
response to virus
response to bacterium
response to herbicide
response to mycotoxin
positive regulation of gene expression
siderophore transport
positive regulation of cell projection organization
response to nutrient levels
cellular response to nutrient levels
response to drug
innate immune response
iron ion homeostasis
protein homotrimerization
cellular response to hydrogen peroxide
cellular response to lipopolysaccharide
cellular response to interleukin-1
cellular response to tumor necrosis factor
extrinsic apoptotic signaling pathway in absence of ligand

Function(s)

protease binding
transporter activity
iron ion binding
small molecule binding
protein homodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P638620	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	339795	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	18829	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	500998	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P638620	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P638620	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P638620	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P638620	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700483986	-	-
Agilent Rat cDNA Microarray (G4105A)	700483986	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10844338	-	-
Affymetrix Rat Gene 1.0 ST Array	10844334	-	-
Affymetrix Rat Gene 1.0 ST Array	10844336	-	-
Affymetrix Rat Gene 1.0 ST Array	10844335	-	-
Affymetrix Rat Gene 1.0 ST Array	10844333	-	-
Affymetrix Rat Gene 1.0 ST Array	10844337	-	-
Affymetrix Rat Gene 1.0 ST Array	10844332	-	-
Affymetrix Rat Gene 1.1 ST Array	10844331	-	-
Rat Genome 230 2.0 Array	1387011_PM_at	-	-
Rat Genome 230 2.0 Array	1387011_at	-	-
Affymetrix HT Rat Focus Array	1387011_at	-	-
Affymetrix HT Rat Focus Array	1387011_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300022177.rn.1	TC0300002875.rn.1	RTA TC
Rat Expression Set 230	1387011_PM_at	-	-
Rat Expression Set 230	1387011_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10844331	-	-
Rat Genome U34 Set	rc_AA946503_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21297561	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1363606	-	-
RatRef-12 Expression BeadChip	ILMN_68587	-	-