Rn00591517_m1 Best Coverage

• Gene Symbol: Syf2
• Gene Name: SYF2 pre-mRNA-splicing factor
• Gene Aliases: Gcipip, P29
• Chromosome Location: Chr.5: 153269638 - 153277562 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Syf2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_133417.1	NP_596908.1	2 - 3	149		93
GenBank mRNA	AF366369.1	-	2 - 3	149		93
	BC081735.1	-	2 - 3	132		93
	BC097289.1	-	2 - 3	157	7445525	93

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500001669.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Syf2

Gene Ontology Categories:

Process(es)

in utero embryonic development
mRNA processing
mitotic G2 DNA damage checkpoint
gastrulation
RNA splicing
embryonic organ development

Function(s)

poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P13183	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	385334	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	954085	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	228211	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	236916	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	471109	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	387385	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	169970	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P13183	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P13183	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P13183	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P13183	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	11230	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10872841	-	-
Affymetrix Rat Gene 1.0 ST Array	10872840	-	-
Affymetrix Rat Gene 1.0 ST Array	10872837	-	-
Affymetrix Rat Gene 1.0 ST Array	10872839	-	-
Affymetrix Rat Gene 1.0 ST Array	10872838	-	-
Affymetrix Rat Gene 1.0 ST Array	10872842	-	-
Affymetrix Rat Gene 1.1 ST Array	10872836	-	-
Rat Genome 230 2.0 Array	1398244_at	-	-
Rat Genome 230 2.0 Array	1398244_PM_at	-	-
Rat Genome 230 2.0 Array	1396107_at	-	-
Rat Genome 230 2.0 Array	1396107_PM_at	-	-
Affymetrix HT Rat Focus Array	1398244_at	-	-
Affymetrix HT Rat Focus Array	1396107_PM_at	-	-
Affymetrix HT Rat Focus Array	1396107_at	-	-
Affymetrix HT Rat Focus Array	1398244_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500012059.rn.1	TC0500001669.rn.1	RTA TC
Rat Expression Set 230	1398244_at	-	-
Rat Expression Set 230	1398244_PM_at	-	-
Rat Expression Set 230	1396107_at	-	-
Rat Expression Set 230	1396107_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10872836	-	-
Rat Genome U34 Set	rc_AA851600_at	-	-
Rat Genome U34 Set	rc_AI228120_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	20932890	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1374217	-	-
RatRef-12 Expression BeadChip	ILMN_63079	-	-