Rn00591537_m1 Best Coverage

• Gene Symbol: Dkc1
• Gene Name: dyskeratosis congenita 1, dyskerin
• Gene Aliases: Nap57
• Chromosome Location: Chr.X: 155844914 - 155862764 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Dkc1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_133419.1	NP_596910.1	9 - 10	1011		53
	XM_008773596.1	XP_008771818.1	9 - 10	1457		53
GenBank mRNA	BC087600.1	-	9 - 10	970		53
	BC099832.1	-	9 - 10	969	7934021	53
	Z34922.1	-	9 - 10	1011		53

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0X00002624.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Dkc1

Panther Classification:

Molecular Function -

centromere DNA-binding protein, chromatin/chromatin-binding, or -regulatory protein

Gene Ontology Categories:

Process(es)

pseudouridine synthesis
RNA-dependent DNA biosynthetic process
rRNA processing
RNA processing
cell proliferation
rRNA pseudouridine synthesis
positive regulation of telomere maintenance via telomerase
box H/ACA snoRNA metabolic process
positive regulation of telomerase activity

Function(s)

telomerase activity
RNA binding
protein binding
pseudouridine synthase activity
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P1035733	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1035733	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P1035733	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P1035733	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P1035733	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700501762	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700143485	-	-
Agilent Rat cDNA Microarray (G4105A)	700501762	-	-
Agilent Rat cDNA Microarray (G4105A)	700143485	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10940563	-	-
Affymetrix Rat Gene 1.1 ST Array	10940563	-	-
Rat Genome 230 2.0 Array	1368649_PM_at	-	-
Rat Genome 230 2.0 Array	1368649_at	-	-
Affymetrix HT Rat Focus Array	1368649_at	-	-
Affymetrix HT Rat Focus Array	1368649_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0X00016182.rn.1	TC0X00002624.rn.1	RTA TC
Rat Expression Set 230	1368649_at	-	-
Rat Expression Set 230	1368649_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10940563	-	-
Rat Genome U34 Set	rc_AA892562_g_at	-	-
Rat Genome U34 Set	rc_AA892562_at	-	-
Rat Genome U34 Set	rc_AA851968_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21756338	-	-