Rn00591783_s1 Best Coverage

• Gene Symbol: Ccr4
• Gene Name: chemokine (C-C motif) receptor 4
• Gene Aliases: Cmkbr4
• Chromosome Location: Chr.8: 122530178 - 122535959 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ccr4
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_133532.2	NP_598216.2	1	953		85
	XM_006243915.2	XP_006243977.1	2	1140		85
GenBank mRNA	AF432872.2	-	1	953		85

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0800003482.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, G-protein coupled receptor, 3' Most, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, Rat Chemokine Panel, 1700, Inventoried, Both primers and probe map within a single exon

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ccr4

Gene Ontology Categories:

Process(es)

neuron migration
tolerance induction
chemotaxis
inflammatory response
immune response
G protein-coupled receptor signaling pathway
response to radiation
response to bacterium
response to antibiotic
positive regulation of positive chemotaxis
chemokine-mediated signaling pathway

Function(s)

molecular_function
C-C chemokine receptor activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P107632	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	107535	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P107632	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P107632	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P107632	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P13201	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10920668	-	-
Affymetrix Rat Gene 1.1 ST Array	10920667	-	-
Rat Genome 230 2.0 Array	1369555_at	-	-
Rat Genome 230 2.0 Array	1369555_PM_at	-	-
Affymetrix HT Rat Focus Array	1369555_at	-	-
Affymetrix HT Rat Focus Array	1369555_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0800028367.rn.1	TC0800003482.rn.1	RTA TC
Rat Expression Set 230	1369555_at	-	-
Rat Expression Set 230	1369555_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10920667	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22068943	-	-
ABI Rat Genome Survey Microarray	22076177	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1361974	-	-
RatRef-12 Expression BeadChip	ILMN_48073	-	-