Rn00591894_m1 Best Coverage

• Gene Symbol: Ppp1r15a
• Gene Name: protein phosphatase 1, regulatory subunit 15A
• Gene Aliases: Gadd34, Myd116, Peg-3, RGD1624209
• Chromosome Location: Chr.1: 101511899 - 101515036 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ppp1r15a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_133546.3	NP_598230.2	2 - 3	1615		92
	XM_006228974.2	XP_006229036.1	3 - 4	1560		92
GenBank mRNA	AF020618.1	-	1 - 2	1791		92
	BC072513.1	-	2 - 3	1597		92

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100005397.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ppp1r15a

Gene Ontology Categories:

Process(es)

regulation of translation
apoptotic process
positive regulation of gene expression
endoplasmic reticulum unfolded protein response
negative regulation of phosphoprotein phosphatase activity
positive regulation of phosphoprotein phosphatase activity
positive regulation of peptidyl-serine phosphorylation
negative regulation of protein dephosphorylation
positive regulation of transcription by RNA polymerase I
protein localization to endoplasmic reticulum
positive regulation of peptidyl-serine dephosphorylation

Function(s)

protein phosphatase 1 binding
protein kinase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P020938	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	319357	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	616744	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P020938	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P020938	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P020938	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P997825	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	701194488	-	-
Agilent Rat cDNA Microarray (G4105A)	701194488	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10721870	-	-
Affymetrix Rat Gene 1.0 ST Array	10721867	-	-
Affymetrix Rat Gene 1.0 ST Array	10721868	-	-
Affymetrix Rat Gene 1.0 ST Array	10721866	-	-
Affymetrix Rat Gene 1.1 ST Array	10721865	-	-
Rat Genome 230 2.0 Array	1370174_at	-	-
Rat Genome 230 2.0 Array	1370174_PM_at	-	-
Affymetrix HT Rat Focus Array	1370174_at	-	-
Affymetrix HT Rat Focus Array	1370174_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100044101.rn.1	TC0100005397.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100044105.rn.1	TC0100005397.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100044102.rn.1	TC0100005397.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100044106.rn.1	TC0100005397.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100044107.rn.1	TC0100005397.rn.1	RTA TC
Rat Expression Set 230	1370174_PM_at	-	-
Rat Expression Set 230	1370174_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10721865	-	-
Rat Genome U34 Set	AF020618_at	-	-
Rat Genome U34 Set	AF020618_g_at	-	-
Rat Genome U34 Set	rc_AI179612_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22152051	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1369158	-	-
RatRef-12 Expression BeadChip	ILMN_62286	-	-