Rn00593198_m1 Best Coverage

• Gene Symbol: Psmc3ip
• Gene Name: PSMC3 interacting protein
• Gene Aliases: Gt198, Tbpip
• Chromosome Location: Chr.10: 89002109 - 89006065 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Psmc3ip
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_134458.2	NP_604453.2	3 - 4	246		70
	XM_006247249.2	XP_006247311.1	3 - 4	1098		70
GenBank mRNA	AF352812.1	-	3 - 4	246		70
	CK840952.1	-	5 - 6			70

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000003818.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Psmc3ip

Gene Ontology Categories:

Process(es)

DNA recombination
positive regulation of transcription by RNA polymerase II
meiotic cell cycle
regulation of nucleic acid-templated transcription

Function(s)

DNA binding
estrogen receptor binding
nuclear receptor coactivator activity
glucocorticoid receptor binding
protein homodimerization activity
thyroid hormone receptor binding
protein dimerization activity
androgen receptor binding
DNA binding domain binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_43_P13277	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	325291	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	595713	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P13277	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_43_P13277	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_43_P13277	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P13277	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10747560	-	-
Affymetrix Rat Gene 1.0 ST Array	10747557	-	-
Affymetrix Rat Gene 1.0 ST Array	10747555	-	-
Affymetrix Rat Gene 1.0 ST Array	10747558	-	-
Affymetrix Rat Gene 1.0 ST Array	10747556	-	-
Affymetrix Rat Gene 1.0 ST Array	10747562	-	-
Affymetrix Rat Gene 1.0 ST Array	10747561	-	-
Affymetrix Rat Gene 1.0 ST Array	10747563	-	-
Affymetrix Rat Gene 1.0 ST Array	10747559	-	-
Affymetrix Rat Gene 1.1 ST Array	10747554	-	-
Rat Genome 230 2.0 Array	1370008_PM_at	-	-
Rat Genome 230 2.0 Array	1370008_at	-	-
Affymetrix HT Rat Focus Array	1370008_PM_at	-	-
Affymetrix HT Rat Focus Array	1370008_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000034309.rn.1	TC1000003818.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR1000034310.rn.1	TC1000003818.rn.1	RTA TC
Rat Expression Set 230	1370008_at	-	-
Rat Expression Set 230	1370008_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10747554	-	-
Rat Genome U34 Set	rc_AI011882_at	-	-
Rat Genome U34 Set	rc_AI146171_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21671764	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1362640	-	-
RatRef-12 Expression BeadChip	ILMN_64770	-	-