Rn00593272_m1 Best Coverage

• Gene Symbol: Camk1
• Gene Name: calcium/calmodulin-dependent protein kinase I
• Gene Aliases: Camki, Gaip
• Chromosome Location: Chr.4: 145289300 - 145300146 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Camk1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_134468.1	NP_604463.1	10 - 11	1025		69
	XM_006236999.2	XP_006237061.1	11 - 12	1694		69
	XM_006237000.2	XP_006237062.1	11 - 12	1690		69
	XM_006237001.2	XP_006237063.1	10 - 11	1557		69
	XM_006237002.2	XP_006237064.1	10 - 11	1484		69
	XM_006237003.2	XP_006237065.1	10 - 11	1483		69
GenBank mRNA	BC071177.1	-	10 - 11	960	7098592	69
	FQ213485.1	-		988		69
	L26288.1	-	10 - 11	1025		69

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400003535.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Protein Kinase, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Camk1

Panther Classification:

Molecular Function -

non-receptor serine/threonine protein kinase

Gene Ontology Categories:

Process(es)

protein phosphorylation
nucleocytoplasmic transport
signal transduction
positive regulation of neuron projection development
negative regulation of protein binding
regulation of protein localization
positive regulation of peptidyl-serine phosphorylation
regulation of protein binding
positive regulation of transcription from RNA polymerase II promoter
positive regulation of protein export from nucleus
regulation of muscle cell differentiation
positive regulation of muscle cell differentiation
positive regulation of synapse structural plasticity
positive regulation of syncytium formation by plasma membrane fusion
positive regulation of dendritic spine development
positive regulation of protein serine/threonine kinase activity
positive regulation of protein acetylation
regulation of histone H3-K9 acetylation

Function(s)

calmodulin-dependent protein kinase activity
protein binding
calmodulin binding
ATP binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P390979	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	919963	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	514043	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	463258	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	690309	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	873202	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	162910	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	459516	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	57430	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	167130	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	38758	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	87027	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	173974	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	40752	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	59941	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P390979	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P390979	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P390979	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P390979	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	700522106	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	82326	-	-
Agilent Rat cDNA Microarray (G4105A)	700522106	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10864626	-	-
Affymetrix Rat Gene 1.0 ST Array	10864625	-	-
Affymetrix Rat Gene 1.0 ST Array	10864624	-	-
Affymetrix Rat Gene 1.0 ST Array	10864628	-	-
Affymetrix Rat Gene 1.0 ST Array	10864627	-	-
Affymetrix Rat Gene 1.0 ST Array	10864630	-	-
Affymetrix Rat Gene 1.1 ST Array	10864623	-	-
Rat Genome 230 2.0 Array	1381561_PM_at	-	-
Rat Genome 230 2.0 Array	1390367_PM_at	-	-
Rat Genome 230 2.0 Array	1367889_PM_at	-	-
Rat Genome 230 2.0 Array	1381561_at	-	-
Rat Genome 230 2.0 Array	1390367_at	-	-
Rat Genome 230 2.0 Array	1367889_at	-	-
Affymetrix HT Rat Focus Array	1367889_at	-	-
Affymetrix HT Rat Focus Array	1367889_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0400024753.rn.1	TC0400003535.rn.1	RTA TC
Rat Expression Set 230	1367889_PM_at	-	-
Rat Expression Set 230	1367889_at	-	-
Rat Expression Set 230	1381561_PM_at	-	-
Rat Expression Set 230	1381561_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10864623	-	-
Rat Genome U34 Set	L24907_at	-	-
Rat Genome U34 Set	L24907_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21347280	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1649942	-	-