Rn00593441_m1 Best Coverage

• Gene Symbol: Prpf18
• Gene Name: pre-mRNA processing factor 18
• Gene Aliases: Pprf18
• Chromosome Location: Chr.17: 77601914 - 77632507 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Prpf18
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_138523.2	NP_612532.1	5 - 6	614		82
GenBank mRNA	AF244920.1	-	5 - 6	609		82

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1700001008.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Prpf18

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Process(es)

mRNA processing
RNA splicing

Function(s)

potassium channel inhibitor activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P491929	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	370582	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	421097	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	754370	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	52131	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	443396	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	55208	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	627444	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	3170	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	532767	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	697781	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	722090	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	951051	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	425895	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	117586	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	931184	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	1266	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	624240	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	711515	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	198712	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	788823	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	619149	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	391051	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	169045	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	102065	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	174649	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P491929	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P491929	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P491929	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P491929	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	702134670	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	11827	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	85815	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	55378	-	-
Agilent Rat cDNA Microarray (G4105A)	702134670	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10796374	-	-
Affymetrix Rat Gene 1.0 ST Array	10796377	-	-
Affymetrix Rat Gene 1.0 ST Array	10796373	-	-
Affymetrix Rat Gene 1.0 ST Array	10796378	-	-
Affymetrix Rat Gene 1.0 ST Array	10796368	-	-
Affymetrix Rat Gene 1.0 ST Array	10796367	-	-
Affymetrix Rat Gene 1.0 ST Array	10796376	-	-
Affymetrix Rat Gene 1.0 ST Array	10796375	-	-
Affymetrix Rat Gene 1.0 ST Array	10796380	-	-
Affymetrix Rat Gene 1.0 ST Array	10796371	-	-
Affymetrix Rat Gene 1.0 ST Array	10796370	-	-
Affymetrix Rat Gene 1.0 ST Array	10796379	-	-
Affymetrix Rat Gene 1.0 ST Array	10796372	-	-
Affymetrix Rat Gene 1.0 ST Array	10796369	-	-
Affymetrix Rat Gene 1.0 ST Array	10796382	-	-
Affymetrix Rat Gene 1.1 ST Array	10796366	-	-
Affymetrix Rat Gene 1.1 ST Array	10796381	-	-
Rat Genome 230 2.0 Array	1399021_PM_at	-	-
Rat Genome 230 2.0 Array	1399021_at	-	-
Rat Genome 230 2.0 Array	1388005_PM_at	-	-
Rat Genome 230 2.0 Array	1388005_at	-	-
Affymetrix HT Rat Focus Array	1399021_at	-	-
Affymetrix HT Rat Focus Array	1399021_PM_at	-	-
Affymetrix HT Rat Focus Array	1388005_PM_at	-	-
Affymetrix HT Rat Focus Array	1388005_at	-	-
Affymetrix Rat Clariom S Assay	PSR1700006945.rn.1	TC1700001008.rn.1	RTA TC
Rat Expression Set 230	1388005_at	-	-
Rat Expression Set 230	1399021_PM_at	-	-
Rat Expression Set 230	1388005_PM_at	-	-
Rat Expression Set 230	1399021_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10796381	-	-
Affymetrix Rat Gene 1.0 ST Array	10796366	-	-
Rat Genome U34 Set	rc_AI029421_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21358772	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1353121	-	-
RatRef-12 Expression BeadChip	ILMN_50750	-	-