Rn00593492_m1 Best Coverage

• Gene Symbol: Stambp
• Gene Name: Stam binding protein
• Gene Aliases: Amsh
• Chromosome Location: Chr.4: 115249343 - 115277341 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Stambp
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_138531.2	NP_612540.1	6 - 7	971		60
	XM_006236726.2	XP_006236788.1	7 - 8	1638		60
	XM_006236727.2	XP_006236789.1	8 - 9	1756		60
	XM_008763045.1	XP_008761267.1	6 - 7	3299		60
	XM_008763046.1	XP_008761268.1	7 - 8	2319		60
	XM_008763047.1	XP_008761269.1	7 - 8	2736		60
	XM_008763048.1	XP_008761270.1	6 - 7	2618		60
GenBank mRNA	AY083159.1	-	5 - 6	795		60
	BC061711.1	-	6 - 7	971	5597943	60

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0400003185.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Stambp

Panther Classification:

Molecular Function -

metalloprotease

Gene Ontology Categories:

Process(es)

mitotic cytokinesis
proteolysis
biological_process
negative regulation of phosphatidylinositol 3-kinase signaling
protein deubiquitination
negative regulation of neuron apoptotic process
negative regulation of Ras protein signal transduction

Function(s)

molecular_function
thiol-dependent ubiquitin-specific protease activity
metallopeptidase activity
protein domain specific binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P137828	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	721778	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	474465	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	918735	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	829541	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	411529	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	639322	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	891088	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	898438	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	145939	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	34144	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	536948	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	87771	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	924191	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	587299	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	440445	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	202513	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	460459	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	109678	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	104343	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P137828	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P137828	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P137828	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P634825	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	74056	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	78688	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10863567	-	-
Affymetrix Rat Gene 1.0 ST Array	10863560	-	-
Affymetrix Rat Gene 1.0 ST Array	10863565	-	-
Affymetrix Rat Gene 1.0 ST Array	10863563	-	-
Affymetrix Rat Gene 1.0 ST Array	10863562	-	-
Affymetrix Rat Gene 1.0 ST Array	10863564	-	-
Affymetrix Rat Gene 1.0 ST Array	10863569	-	-
Affymetrix Rat Gene 1.0 ST Array	10863566	-	-
Affymetrix Rat Gene 1.0 ST Array	10863568	-	-
Affymetrix Rat Gene 1.0 ST Array	10863561	-	-
Affymetrix Rat Gene 1.1 ST Array	10863559	-	-
Rat Genome 230 2.0 Array	1370476_at	-	-
Rat Genome 230 2.0 Array	1370476_PM_at	-	-
Affymetrix HT Rat Focus Array	1370476_PM_at	-	-
Affymetrix HT Rat Focus Array	1370476_at	-	-
Affymetrix Rat Clariom S Assay	PSR0400022627.rn.1	TC0400003185.rn.1	RTA TC
Rat Expression Set 230	1370476_PM_at	-	-
Rat Expression Set 230	1370476_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10863559	-	-
Rat Genome U34 Set	rc_H33725_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21897732	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1366608	-	-
RatRef-12 Expression BeadChip	ILMN_55048	-	-