Rn00593511_m1

Gene Symbol:

Spon2 LOC100910790

Gene Name:

spondin 2, extracellular matrix protein

spondin-2-like

Gene Aliases:

-

-

Chromosome Location:

Chr.14: 82818735 - 82824529 on Build Rnor_6.0

Chromosome Location:

Chr.14: 82867099 - 82889642 on Build Rnor_6.0

Species:

Rat

Species Specific ID (Flybase ID):

-

-

Assay Details

Gene Symbol: Spon2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_138533.3	NP_612542.1	4 - 5	831		57
GenBank mRNA	BC078734.1	-	4 - 5	831		57

Gene Symbol: LOC100910790
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_008770410.1	XP_008768632.1		947		57

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1400000855.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Spon2
Click here to find siRNAs for Gene LOC100910790

Gene Ontology Categories:

Process(es)

mast cell mediated immunity
cell adhesion
opsonization
response to lipopolysaccharide
positive regulation of interleukin-6 production
positive regulation of tumor necrosis factor production
defense response to bacterium
induction of bacterial agglutination
innate immune response
defense response to fungus
defense response to virus
positive regulation of macrophage cytokine production
cellular response to lipopolysaccharide

Function(s)

lipopolysaccharide binding
antigen binding
signaling receptor binding
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P051039	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	888164	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P051039	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P051039	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P051039	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P421417	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10777793	-	-
Affymetrix Rat Gene 1.0 ST Array	10777789	-	-
Affymetrix Rat Gene 1.0 ST Array	10777792	-	-
Affymetrix Rat Gene 1.0 ST Array	10777790	-	-
Affymetrix Rat Gene 1.0 ST Array	10777791	-	-
Affymetrix Rat Gene 1.1 ST Array	10777788	-	-
Rat Genome 230 2.0 Array	1370847_at	-	-
Rat Genome 230 2.0 Array	1370847_PM_at	-	-
Affymetrix HT Rat Focus Array	1370847_PM_at	-	-
Affymetrix HT Rat Focus Array	1370847_at	-	-
Affymetrix Rat Clariom S Assay	PSR1400006039.rn.1	TC1400000855.rn.1	RTA TC
Rat Expression Set 230	1370847_PM_at	-	-
Rat Expression Set 230	1370847_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10777788	-	-
Rat Genome U34 Set	rc_AA801238_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22266790	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376643	-	-