Rn00593872_m1 Best Coverage

• Gene Symbol: Dnajc21
• Gene Name: DnaJ (Hsp40) homolog, subfamily C, member 21
• Gene Aliases: Dnaja5
• Chromosome Location: Chr.2: 60419446 - 60446666 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Dnajc21
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_138856.2	NP_620211.2	3 - 4	315		70
	XM_008760746.1	XP_008758968.1	7 - 8	1191		70
GenBank mRNA	AF492384.1	-	2 - 3	238		70
	BC086587.1	-	3 - 4	315		70
	BC158554.1	-	3 - 4	534		70

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0200003068.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Dnajc21

Gene Ontology Categories:

Function(s)

RNA binding
zinc ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P598733	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	926991	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	382189	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	303485	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	696446	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	402505	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	668951	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	260653	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	457730	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	466806	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	459530	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	18091	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	73286	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	53569	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P598733	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P598733	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P598733	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P598733	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	5855	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10821901	-	-
Affymetrix Rat Gene 1.0 ST Array	10821903	-	-
Affymetrix Rat Gene 1.0 ST Array	10821905	-	-
Affymetrix Rat Gene 1.0 ST Array	10821906	-	-
Affymetrix Rat Gene 1.0 ST Array	10821908	-	-
Affymetrix Rat Gene 1.0 ST Array	10821902	-	-
Affymetrix Rat Gene 1.0 ST Array	10821909	-	-
Affymetrix Rat Gene 1.0 ST Array	10821907	-	-
Affymetrix Rat Gene 1.0 ST Array	10821904	-	-
Affymetrix Rat Gene 1.1 ST Array	10821900	-	-
Rat Genome 230 2.0 Array	1369543_PM_s_at	-	-
Rat Genome 230 2.0 Array	1369543_s_at	-	-
Affymetrix HT Rat Focus Array	1369543_s_at	-	-
Affymetrix HT Rat Focus Array	1369543_PM_s_at	-	-
Affymetrix Rat Clariom S Assay	PSR0200021467.rn.1	TC0200003068.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200021473.rn.1	TC0200003068.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200021475.rn.1	TC0200003068.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200021472.rn.1	TC0200003068.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200021468.rn.1	TC0200003068.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200021471.rn.1	TC0200003068.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200021469.rn.1	TC0200003068.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200021474.rn.1	TC0200003068.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0200021470.rn.1	TC0200003068.rn.1	RTA TC
Rat Expression Set 230	1369543_s_at	-	-
Rat Expression Set 230	1369543_PM_s_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10821900	-	-
Rat Genome U34 Set	rc_AA850140_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21546292	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1362787	-	-
RatRef-12 Expression BeadChip	ILMN_69034	-	-