Rn00593950_m1 Best Coverage

• Gene Symbol: Ptgr1
• Gene Name: prostaglandin reductase 1
• Gene Aliases: Dig1, Ltb4dh
• Chromosome Location: Chr.5: 76110753 - 76129361 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ptgr1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_138863.2	NP_620218.1	8 - 9	795		62
GenBank mRNA	BC089775.1	-	8 - 9	795	7307365	62
	FQ218841.1	-	8 - 9	814		62
	FQ220898.1	-	8 - 9	816		62
	FQ229147.1	-	8 - 9	811		62
	FQ229679.1	-	8 - 9	811		62
	U66322.2	-	7 - 8	760		62

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500002841.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, 3' Most, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ptgr1

Panther Classification:

Molecular Function -

reductase

Gene Ontology Categories:

Process(es)

prostaglandin metabolic process
response to toxic substance
oxidation-reduction process

Function(s)

zinc ion binding
2-alkenal reductase [NAD(P)] activity
13-prostaglandin reductase activity
15-oxoprostaglandin 13-oxidase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_42_P698240	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	548280	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	968477	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	690897	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	529322	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	267908	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	295405	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	527046	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	373848	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	283793	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	909048	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	919290	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	653266	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	621505	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	357916	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	112580	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	155209	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P698240	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_42_P698240	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_42_P698240	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_42_P698240	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	702126464	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	23350	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	33756	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	94700	-	-
Agilent Rat cDNA Microarray (G4105A)	702126464	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10877133	-	-
Affymetrix Rat Gene 1.0 ST Array	10877134	-	-
Affymetrix Rat Gene 1.0 ST Array	10877135	-	-
Affymetrix Rat Gene 1.0 ST Array	10877132	-	-
Affymetrix Rat Gene 1.0 ST Array	10877131	-	-
Affymetrix Rat Gene 1.0 ST Array	10877137	-	-
Affymetrix Rat Gene 1.0 ST Array	10877136	-	-
Affymetrix Rat Gene 1.0 ST Array	10877139	-	-
Affymetrix Rat Gene 1.0 ST Array	10877138	-	-
Affymetrix Rat Gene 1.0 ST Array	10877140	-	-
Affymetrix Rat Gene 1.1 ST Array	10877130	-	-
Rat Genome 230 2.0 Array	1388102_PM_at	-	-
Rat Genome 230 2.0 Array	1388102_at	-	-
Affymetrix HT Rat Focus Array	1388102_PM_at	-	-
Affymetrix HT Rat Focus Array	1388102_at	-	-
Affymetrix Rat Clariom S Assay	PSR0500021057.rn.1	TC0500002841.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500021058.rn.1	TC0500002841.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500021056.rn.1	TC0500002841.rn.1	RTA TC
Rat Expression Set 230	1388102_PM_at	-	-
Rat Expression Set 230	1388102_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10877130	-	-
Rat Genome U34 Set	U66322_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21212895	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1349635	-	-
RatRef-12 Expression BeadChip	ILMN_62869	-	-