Rn00594002_m1 Best Coverage

• Gene Symbol: Tfpt
• Gene Name: TCF3 (E2A) fusion partner
• Gene Aliases: Amida
• Chromosome Location: Chr.1: 64162870 - 64172307 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Tfpt
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_138870.1	NP_620225.1	1 - 2	255		82
	XM_006228036.2	XP_006228098.1	2 - 3	282		82
	XM_006228037.2	XP_006228099.1	2 - 3	282		82
GenBank mRNA	AB029495.1	-	1 - 2	255		82

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0100000712.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Tfpt

Gene Ontology Categories:

Process(es)

DNA repair
DNA recombination
transcription, DNA-templated
regulation of transcription, DNA-templated
apoptotic process
male gonad development
positive regulation of apoptotic process
apoptotic signaling pathway

Function(s)

DNA binding
protein binding
protein kinase binding
protein heterodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P417658	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	432365	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	799627	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	101932	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	102755	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	458942	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	249650	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	646926	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	603621	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	126564	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P417658	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P417658	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P417658	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P417658	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10703749	-	-
Affymetrix Rat Gene 1.0 ST Array	10703745	-	-
Affymetrix Rat Gene 1.0 ST Array	10703747	-	-
Affymetrix Rat Gene 1.0 ST Array	10703750	-	-
Affymetrix Rat Gene 1.0 ST Array	10703748	-	-
Affymetrix Rat Gene 1.0 ST Array	10703746	-	-
Affymetrix Rat Gene 1.1 ST Array	10703744	-	-
Rat Genome 230 2.0 Array	1388099_a_at	-	-
Rat Genome 230 2.0 Array	1392766_PM_at	-	-
Rat Genome 230 2.0 Array	1392766_at	-	-
Rat Genome 230 2.0 Array	1388099_PM_a_at	-	-
Affymetrix HT Rat Focus Array	1388099_PM_a_at	-	-
Affymetrix HT Rat Focus Array	1388099_a_at	-	-
Affymetrix Rat Clariom S Assay	PSR0100004703.rn.1	TC0100000712.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100004702.rn.1	TC0100000712.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0100004704.rn.1	TC0100000712.rn.1	RTA TC
Rat Expression Set 230	1388099_a_at	-	-
Rat Expression Set 230	1388099_PM_a_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10703744	-	-
Rat Genome U34 Set	rc_AA997953_at	-	-
Rat Genome U34 Set	rc_AI228841_s_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22008273	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1352378	-	-
RatRef-12 Expression BeadChip	ILMN_60736	-	-